RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 CYB5BO43169 146 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 NOL3O60936 208 aaKnown RBP13.41□□□□□ -0.26
COL6A1-204ENST00000486023 SERPINE2P07093 398 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 IGHV4-30-4P0DP06 118 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 GPR183P32249 361 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 UCP3P55916 312 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 WT1-ASQ06250 92 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 FAM209BQ5JX69 171 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 LCN12Q6JVE5 192 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 H2BFWTQ7Z2G1 175 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 Q8N1Y9 231 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 OR4A16Q8NH70 328 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 RAB2BQ8WUD1 216 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 C15orf40Q8WUR7 153 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 DIRAS2Q96HU8 199 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 CXorf58Q96LI9 332 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 WWC2-AS2Q96NR7 200 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 C6orf62Q9GZU0 229 aaPredicted RBP13.41□□□□□ -0.26
COL6A1-204ENST00000486023 THYN1Q9P016 225 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 DMRT1Q9Y5R6 373 aa13.41□□□□□ -0.26
COL6A1-204ENST00000486023 TRBV7-1A0A0A6YYK4 115 aa13.4□□□□□ -0.26
COL6A1-204ENST00000486023 RAB3DO95716 219 aa13.4□□□□□ -0.26
COL6A1-204ENST00000486023 FOLR2P14207 255 aa13.4□□□□□ -0.26
COL6A1-204ENST00000486023 IL18Q14116 193 aa13.4□□□□□ -0.26
COL6A1-204ENST00000486023 CD300EQ496F6 205 aaPredicted RBP13.4□□□□□ -0.26
COL6A1-204ENST00000486023 FAM106AQ4KMX7 169 aa13.4□□□□□ -0.26
COL6A1-204ENST00000486023 ADAMTSL5Q6ZMM2 481 aa13.4□□□□□ -0.26
COL6A1-204ENST00000486023 GTSCR1Q86UQ5 136 aa13.4□□□□□ -0.26
COL6A1-204ENST00000486023 Q8N402 240 aa13.4□□□□□ -0.26
COL6A1-204ENST00000486023 CACNG8Q8WXS5 425 aa13.4□□□□□ -0.26
COL6A1-204ENST00000486023 LSM10Q969L4 123 aaKnown RBP13.4□□□□□ -0.26
COL6A1-204ENST00000486023 MRGPRFQ96AM1 343 aa13.4□□□□□ -0.26
COL6A1-204ENST00000486023 NDUFA4L2Q9NRX3 87 aa13.4□□□□□ -0.26
COL6A1-204ENST00000486023 PRNDQ9UKY0 176 aa13.4□□□□□ -0.26
COL6A1-204ENST00000486023 C2orf70A6NJV1 201 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 DBX1A6NMT0 343 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 IGKV1-39P01597 117 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 IGKV1D-39P04432 117 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 PIGPP57054 158 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 TAS2R19P59542 299 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 GUCA2BQ16661 112 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 FAAP20Q6NZ36 180 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 STEAP1BQ6NZ63 245 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 PLET1Q6UQ28 207 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 ARRDC1Q8N5I2 433 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 GDPD1Q8N9F7 314 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 TMEM229BQ8NBD8 167 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 UBAC2Q8NBM4 344 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 TMEM56Q96MV1 263 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 TSC22D3Q99576 134 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 SRSF8Q9BRL6 282 aaKnown RBP13.39□□□□□ -0.27
COL6A1-204ENST00000486023 TUBA4BQ9H853 241 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 FKBP11Q9NYL4 201 aa13.39□□□□□ -0.27
COL6A1-204ENST00000486023 RPL5P46777 297 aaKnown RBP13.38□□□□□ -0.27
COL6A1-204ENST00000486023 TMBIM6P55061 237 aa13.38□□□□□ -0.27
COL6A1-204ENST00000486023 IZUMO4Q1ZYL8 232 aa13.38□□□□□ -0.27
COL6A1-204ENST00000486023 SP6Q3SY56 376 aa13.38□□□□□ -0.27
COL6A1-204ENST00000486023 THOC7Q6I9Y2 204 aaKnown RBP13.38□□□□□ -0.27
COL6A1-204ENST00000486023 HSD17B13Q7Z5P4 300 aaPredicted RBP13.38□□□□□ -0.27
COL6A1-204ENST00000486023 GPHB5Q86YW7 130 aa13.38□□□□□ -0.27
COL6A1-204ENST00000486023 MARCH1Q8TCQ1 289 aa13.38□□□□□ -0.27
COL6A1-204ENST00000486023 SEC22AQ96IW7 307 aa13.38□□□□□ -0.27
COL6A1-204ENST00000486023 SIGLEC8Q9NYZ4 499 aa13.38□□□□□ -0.27
COL6A1-204ENST00000486023 COPZ2Q9P299 210 aa13.38□□□□□ -0.27
COL6A1-204ENST00000486023 HUWE1Q7Z6Z7 4374 aaKnown RBP13.37□□□□□ -0.27
COL6A1-204ENST00000486023 CCDC160A6NGH7 325 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 OR2T8A6NH00 312 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 GABARAPH6UMI1 98 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 PTBP1P26599 531 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL6A1-204ENST00000486023 TRIM16LQ309B1 348 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 DEFB114Q30KQ6 69 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 TM4SF20Q53R12 229 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 SPINK9Q5DT21 86 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 LHFPL1Q86WI0 220 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 TERB2Q8NHR7 220 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 ZNF502Q8TBZ5 544 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 ZFAND1Q8TCF1 268 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 DYNC2LI1Q8TCX1 351 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 TP53RKQ96S44 253 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 ZMAT4Q9H898 229 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 F11RQ9Y624 299 aaKnown RBP13.37□□□□□ -0.27
COL6A1-204ENST00000486023 TENM3Q9P273 2699 aa13.37□□□□□ -0.27
COL6A1-204ENST00000486023 C3orf85A0A1B0GTC6 90 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 C15orf61A6NNL5 157 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 LGALS9O00182 355 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 TPPPO94811 219 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 TBPP20226 339 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 CBLN1P23435 193 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 AKR1C2P52895 323 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 MFAP2P55001 183 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 CD81P60033 236 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 Q56UQ5 140 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 UXS1Q8NBZ7 420 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 OR13C8Q8NGS7 320 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 OR5B3Q8NH48 314 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 MISP3Q96FF7 219 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 RCHY1Q96PM5 261 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 PLEKHA3Q9HB20 300 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 TMEM14BQ9NUH8 114 aa13.36□□□□□ -0.27
COL6A1-204ENST00000486023 CCDC59Q9P031 241 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms