RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 EIF4EBP2Q13542 120 aaPredicted RBP8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 ABLIM2Q6H8Q1 611 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 C11orf44Q8N8P7 122 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 JKAMPQ9P055 326 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 TAF1LQ8IZX4 1826 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 TRBV7-9A0A0J9YWB2 115 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 MSGN1A6NI15 193 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 AGAP20933 346 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 OR10S1Q8NGN2 331 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 WNT10AQ9GZT5 417 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 MRPS18CQ9Y3D5 142 aaKnown RBP8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 HOXA5P20719 270 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 SRIP30626 198 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 CFHR1Q03591 330 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 PKIAP61925 76 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 COTL1Q14019 142 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 COL5A1-AS1Q5SY13 56 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 SLC25A34Q6PIV7 304 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 PARLQ9H300 379 aa8.93□□□□□ -0.98
SRGAP3-207ENST00000485983 CCDC88CQ9P219 2028 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 RGPD4Q7Z3J3 1758 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 IGKV1D-42A0A075B6H8 117 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 EIF3GO75821 320 aaKnown RBP eCLIP8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 WNT2P09544 360 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 HBBP68871 147 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 PSG7Q13046 419 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 TMEM42Q69YG0 159 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 LRTM2Q8N967 370 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 MRPL20Q9BYC9 149 aaKnown RBP8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 TMEM160Q9NX00 188 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 SPATA45Q537H7 98 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 GGACTQ9BVM4 153 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 NXT2Q9NPJ8 142 aaKnown RBP8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 C3orf36Q3SXR2 165 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 RNASEH2CQ8TDP1 164 aaKnown RBP8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 SCGB3A1Q96QR1 104 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 TRBV9A0A0B4J1U6 114 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 LILRA1O75019 489 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 ATP5LO75964 103 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 C1QL1O75973 258 aa8.92□□□□□ -0.98
SRGAP3-207ENST00000485983 IGHV3OR16-8A0A075B7F1 116 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 LINC00862A6NCI5 91 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 ZNF688P0C7X2 276 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 SMIM6P0DI80 62 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 FAM166AQ6J272 317 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 F11RQ9Y624 299 aaKnown RBP8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 DOCK5Q9H7D0 1870 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 TRIP12Q14669 1992 aaPredicted RBP8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 AKAP6Q13023 2319 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 PLP1P60201 277 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 OR9G4Q8NGQ1 327 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 CACNG8Q8WXS5 425 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 DMRTA2Q96SC8 542 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 IQCF6A8MYZ5 107 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 C3orf56Q8N813 242 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 IMMP1LQ96LU5 166 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 TRAV14DV4A0A0A6YYC5 116 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 IGLV3-19P01714 112 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 CD7P09564 240 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 TMEM187Q14656 261 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 C20orf204Q6ZNR8 217 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 TMEM136Q6ZRR5 245 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 OR5AN1Q8NGI8 311 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 OR52E5Q8NH55 327 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 FAM131CQ96AQ9 280 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 SLC50A1Q9BRV3 221 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 TRAV40A0A0B4J280 105 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 C1QCP02747 245 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 ZNF79Q15937 498 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 C2orf68Q2NKX9 166 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 CENPWQ5EE01 88 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 PLSCR2Q9NRY7 297 aa8.91□□□□□ -0.98
SRGAP3-207ENST00000485983 TMEM14DPA8MWL7 114 aa8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 C4orf51C9J302 202 aa8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 SAP30O75446 220 aa8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 WISP3O95389 354 aaPredicted RBP8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 CYB5R2Q6BCY4 276 aa8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 ASPHD2Q6ICH7 369 aa8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 PMCHL2Q9BQD1 86 aa8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 PEX7O00628 323 aa8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 OTX1P32242 354 aaPredicted RBP8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 LTBRP36941 435 aa8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 ZNF415Q09FC8 603 aa8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 ZNF414Q96IQ9 312 aa8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 AKIRIN1Q9H9L7 192 aaPredicted RBP8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 UNQ6494/PRO21346Q6UXR6 183 aa8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 TMEM133Q9H2Q1 129 aa8.9□□□□□ -0.98
SRGAP3-207ENST00000485983 KIAA1644Q3SXP7 199 aa8.9□□□□□ -0.99
SRGAP3-207ENST00000485983 TTC32Q5I0X7 151 aa8.9□□□□□ -0.99
SRGAP3-207ENST00000485983 TCF23Q7RTU1 214 aa8.9□□□□□ -0.99
SRGAP3-207ENST00000485983 CIARTQ8N365 385 aaPredicted RBP8.9□□□□□ -0.99
SRGAP3-207ENST00000485983 TRAV8-6A0A0B4J262 113 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 TBR1Q16650 682 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 BIVMQ86UB2 503 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 PSMG3Q9BT73 122 aaPredicted RBP8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 C1QTNF5Q9BXJ0 243 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 C5orf66Q9H5L9 145 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 PPP1R3EQ9H7J1 279 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 CACNA1BQ00975 2339 aa8.89□□□□□ -0.99
SRGAP3-207ENST00000485983 LOC102723996A0A087X1L8 192 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms