RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 LFNGQ8NES3 379 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 PIFOQ8TCI5 191 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 FLYWCH2Q96CP2 140 aaKnown RBP9.06□□□□□ -0.96
SND1-212ENST00000485871 HARBI1Q96MB7 349 aa9.06□□□□□ -0.96
SND1-212ENST00000485871 CIB3Q96Q77 187 aaPredicted RBP9.06□□□□□ -0.96
SND1-212ENST00000485871 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.06□□□□□ -0.96
SND1-212ENST00000485871 TNCP24821 2201 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 FAM24AA6NFZ4 105 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 INAFM1C9JVW0 142 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 H7C2Y5 167 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 HRASP01112 189 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 IGKV1D-33P01593 117 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 IGKV1-33P01594 117 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 SNRNP70P08621 437 aaKnown RBP9.05□□□□□ -0.96
SND1-212ENST00000485871 SAA1P0DJI8 122 aaPredicted RBP9.05□□□□□ -0.96
SND1-212ENST00000485871 CNTFRP26992 372 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 AARDQ4LEZ3 155 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 FAM120AOSQ5T036 256 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 PXDC1Q5TGL8 231 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 OR4A47Q6IF82 309 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 DPPA3Q6W0C5 159 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 THNSL2Q86YJ6 484 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 BCL6BQ8N143 479 aaPredicted RBP9.05□□□□□ -0.96
SND1-212ENST00000485871 LYPD6BQ8NI32 183 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 NANPQ8TBE9 248 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 EAF1Q96JC9 268 aaPredicted RBP9.05□□□□□ -0.96
SND1-212ENST00000485871 RHOVQ96L33 236 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 ATP5SQ99766 215 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 RNF5Q99942 180 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 PARD6GQ9BYG4 376 aaPredicted RBP9.05□□□□□ -0.96
SND1-212ENST00000485871 SMIM3Q9BZL3 60 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 MS4A7Q9GZW8 240 aaPredicted RBP9.05□□□□□ -0.96
SND1-212ENST00000485871 TMEM140Q9NV12 185 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 BET1LQ9NYM9 111 aa9.05□□□□□ -0.96
SND1-212ENST00000485871 ZANQ9Y493 2812 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 ANK3Q12955 4377 aaKnown RBP9.04□□□□□ -0.96
SND1-212ENST00000485871 FBN1P35555 2871 aaKnown RBP9.04□□□□□ -0.96
SND1-212ENST00000485871 TRAV3A0A0B4J244 114 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 MDFIC2A0A1B0GVS7 189 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 IGSF23A1L1A6 192 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 BTBD17A6NE02 478 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 FBXO24O75426 580 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 NDUFA3O95167 84 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 IFNA5P01569 189 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 OR8U8P0C7N1 319 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 CD24P25063 80 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 LGALS7P47929 136 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 RELBQ01201 579 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 NHLH2Q02577 135 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 BTNL8Q6UX41 500 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 NPBQ8NG41 125 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 TMEM167AQ8TBQ9 72 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 LINC00052Q96N35 136 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 TSNAXQ99598 290 aaKnown RBP9.04□□□□□ -0.96
SND1-212ENST00000485871 PRDM13Q9H4Q3 707 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 TMEM160Q9NX00 188 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 HSPB7Q9UBY9 170 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 ATRQ13535 2644 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 HIVEP2P31629 2446 aa9.04□□□□□ -0.96
SND1-212ENST00000485871 UPK2O00526 184 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 PLXNB1O43157 2135 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 MOSP00540 346 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 FBP1P09467 338 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 BRS3P32247 399 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 CAMLGP49069 296 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 PAX9P55771 341 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 UBE2KP61086 200 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 ERVK-16P61578 105 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 RPS16P62249 146 aaKnown RBP9.03□□□□□ -0.96
SND1-212ENST00000485871 TNFRSF9Q07011 255 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 PSG5Q15238 335 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 ATP6V1FQ16864 119 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 DEFB112Q30KQ8 113 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 Q6ZRG5 221 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 SSX9Q7RTT3 188 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 H2BFWTQ7Z2G1 175 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 OR5C1Q8NGR4 320 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 OR2T10Q8NGZ9 312 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 ZNF48Q96MX3 618 aaPredicted RBP9.03□□□□□ -0.96
SND1-212ENST00000485871 AIFM2Q9BRQ8 373 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 MAGT1Q9H0U3 335 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 HIPK2Q9H2X6 1198 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 SMDT1Q9H4I9 107 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 WFDC1Q9HC57 220 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 TPSG1Q9NRR2 321 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 PSENENQ9NZ42 101 aa9.03□□□□□ -0.96
SND1-212ENST00000485871 TMEM218A2RU14 115 aa9.02□□□□□ -0.97
SND1-212ENST00000485871 C15orf61A6NNL5 157 aa9.02□□□□□ -0.97
SND1-212ENST00000485871 KBTBD11O94819 623 aa9.02□□□□□ -0.97
SND1-212ENST00000485871 TSPAN15O95858 294 aa9.02□□□□□ -0.97
SND1-212ENST00000485871 PRH1P02810 166 aa9.02□□□□□ -0.97
SND1-212ENST00000485871 RAB2AP61019 212 aa9.02□□□□□ -0.97
SND1-212ENST00000485871 RPP30P78346 268 aaKnown RBP9.02□□□□□ -0.97
SND1-212ENST00000485871 SSBP2P81877 361 aaPredicted RBP9.02□□□□□ -0.97
SND1-212ENST00000485871 LRRC75BQ2VPJ9 315 aa9.02□□□□□ -0.97
SND1-212ENST00000485871 PDLIM3Q53GG5 364 aaPredicted RBP9.02□□□□□ -0.97
SND1-212ENST00000485871 IL17RELQ6ZVW7 336 aa9.02□□□□□ -0.97
SND1-212ENST00000485871 ZNF429Q86V71 674 aa9.02□□□□□ -0.97
SND1-212ENST00000485871 TEX29Q8N6K0 151 aa9.02□□□□□ -0.97
SND1-212ENST00000485871 TEX45Q8NA69 505 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms