RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	BTNL8	Q6UX41	500 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	UNQ9165/PRO28630	Q6UXU0	137 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	LAX1	Q8IWV1	398 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	TMEM61	Q8N0U2	210 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	DMBX1	Q8NFW5	382 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	OR5AP2	Q8NGF4	316 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	OR10W1	Q8NGF6	305 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	OR4A5	Q8NH83	315 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	GIMAP1	Q8WWP7	306 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	AIFM2	Q9BRQ8	373 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	KRTAP9-2	Q9BYQ4	174 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	COMMD5	Q9GZQ3	224 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	IFT46	Q9NQC8	304 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	TMEM140	Q9NV12	185 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	MLX	Q9UH92	298 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550	DNAH10	Q8IVF4	4471 aa		7.93	□□□□□ -1.14
HMGN1-215	ENST00000485550		A0A0A6YYH2	397 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	IGHV3-21	A0A0B4J1V1	117 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	IGLC7	A0M8Q6	106 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550		A6NJ64	397 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	RBFOX2	O43251	390 aa	Known RBP eCLIP	7.92	□□□□□ -1.14	1e-18	■□□□□ 8.3
HMGN1-215	ENST00000485550	PMP2	P02689	132 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	GNRHR	P30968	328 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	CBX5	P45973	191 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	HERV-K104	P61576	105 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	ZNF585B	Q52M93	769 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	SLC25A24	Q6NUK1	477 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	SLC16A13	Q7RTY0	426 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	RPP25L	Q8N5L8	163 aa	Known RBP	7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	OR52B4	Q8NGK2	314 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	S100A16	Q96FQ6	103 aa	Known RBP	7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	CXorf58	Q96LI9	332 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	ZNF2	Q9BSG1	426 aa	Predicted RBP	7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	HINT2	Q9BX68	163 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	EHF	Q9NZC4	300 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	NSG2	Q9Y328	171 aa		7.92	□□□□□ -1.14
HMGN1-215	ENST00000485550	KIAA1109	Q2LD37	5005 aa		7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	TRBV7-1	A0A0A6YYK4	115 aa		7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	TEX50	A0A1B0GTY4	177 aa		7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	XRCC3	O43542	346 aa		7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	PGLYRP1	O75594	196 aa	Predicted RBP	7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	RLN1	P04808	185 aa		7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	OR13C7	P0DN81	318 aa		7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	RPS19	P39019	145 aa	Known RBP	7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	LPAR6	P43657	344 aa		7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	POU2AF1	Q16633	256 aa		7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	KLK9	Q2XQG4	91 aa		7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	PLET1	Q6UQ28	207 aa		7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	ZNF502	Q8TBZ5	544 aa		7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	KLK9	Q9UKQ9	250 aa		7.91	□□□□□ -1.14
HMGN1-215	ENST00000485550	IGHV3OR16-8	A0A075B7F1	116 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	OR2T8	A6NH00	312 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550		A8MWP6	167 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	KRAS	P01116	189 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	TRAPPC2	P0DI81	140 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	TRAPPC2B	P0DI82	140 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	PTBP1	P26599	531 aa	Known RBP eCLIP	7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	TAS2R20	P59543	309 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	WT1-AS	Q06250	92 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	PMS2P11	Q13670	270 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	TMEM69	Q5SWH9	247 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	DHRS11	Q6UWP2	260 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	RBPMS2	Q6ZRY4	209 aa	Known RBP	7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	SAMD12	Q8N8I0	201 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	CD300LF	Q8TDQ1	290 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	QTRT1	Q9BXR0	403 aa	Known RBP	7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	PLEKHA2	Q9HB19	425 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	THYN1	Q9P016	225 aa		7.9	□□□□□ -1.14
HMGN1-215	ENST00000485550	KRTAP9-6	A0A140TA67	174 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	MARCH11	A6NNE9	402 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	TGOLN2	O43493	480 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	ZNF207	O43670	478 aa	Known RBP	7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	DEDD	O75618	318 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	SERPINE2	P07093	398 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	F2R	P25116	425 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	HLA-DMA	P28067	261 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	G6PC	P35575	357 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	ERVK-16	P61578	105 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	KCTD21	Q4G0X4	260 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	UBE2NL	Q5JXB2	153 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	GDPD1	Q8N9F7	314 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	UBAC2	Q8NBM4	344 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	TSPAN14	Q8NG11	270 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	OR1L6	Q8NGR2	347 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	OR1L8	Q8NGR8	309 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	OR5H2	Q8NGV7	314 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	GATAD1	Q8WUU5	269 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	FCAMR	Q8WWV6	532 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	MOB3A	Q96BX8	217 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	COMMD9	Q9P000	198 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	MRPL27	Q9P0M9	148 aa	Known RBP	7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	UBQLN2	Q9UHD9	624 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	UFC1	Q9Y3C8	167 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	OR51B2	Q9Y5P1	312 aa		7.89	□□□□□ -1.15
HMGN1-215	ENST00000485550	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	7.88	□□□□□ -1.15
HMGN1-215	ENST00000485550	SCO2	A0A1W2PP80	73 aa		7.88	□□□□□ -1.15
HMGN1-215	ENST00000485550	C8orf88	P0DMB2	117 aa		7.88	□□□□□ -1.15
HMGN1-215	ENST00000485550	PRSS3	P35030	304 aa		7.88	□□□□□ -1.15
HMGN1-215	ENST00000485550	MFAP2	P55001	183 aa		7.88	□□□□□ -1.15
HMGN1-215	ENST00000485550	ANKRD55	Q3KP44	614 aa		7.88	□□□□□ -1.15

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