RNA–Protein interactions for RNA: ENST00000485306.1

TRIM54-203, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-203ENST00000485306 G3V318 75 aa12.94□□□□□ -0.34
TRIM54-203ENST00000485306 IFNA21P01568 189 aa12.94□□□□□ -0.34
TRIM54-203ENST00000485306 PPIFP30405 207 aaKnown RBP12.94□□□□□ -0.34
TRIM54-203ENST00000485306 HOXD3P31249 432 aaPredicted RBP12.94□□□□□ -0.34
TRIM54-203ENST00000485306 G6PCP35575 357 aa12.94□□□□□ -0.34
TRIM54-203ENST00000485306 EGFEM1PQ0D2K5 195 aa12.94□□□□□ -0.34
TRIM54-203ENST00000485306 TMEM267Q0VDI3 215 aaPredicted RBP12.94□□□□□ -0.34
TRIM54-203ENST00000485306 DEFB121Q5J5C9 76 aa12.94□□□□□ -0.34
TRIM54-203ENST00000485306 OR4A47Q6IF82 309 aa12.94□□□□□ -0.34
TRIM54-203ENST00000485306 PPP1R27Q86WC6 154 aa12.94□□□□□ -0.34
TRIM54-203ENST00000485306 MMD2Q8IY49 270 aa12.94□□□□□ -0.34
TRIM54-203ENST00000485306 SLC35G3Q8N808 338 aa12.94□□□□□ -0.34
TRIM54-203ENST00000485306 OR5M8Q8NGP6 311 aa12.94□□□□□ -0.34
TRIM54-203ENST00000485306 UBE2E2Q96LR5 201 aa12.94□□□□□ -0.34
TRIM54-203ENST00000485306 CACFD1Q9UGQ2 172 aa12.94□□□□□ -0.34
TRIM54-203ENST00000485306 DBX1A6NMT0 343 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 UPK2O00526 184 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 SNAPC5O75971 98 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 KBTBD11O94819 623 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 IGKV1-5P01602 117 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 IGLV1-40P01703 118 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 P0C879 139 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 SLC25A6P12236 298 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 MAS1LP35410 378 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 KRTAP10-11P60412 298 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 CX3CL1P78423 397 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 NDPQ00604 133 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 DEFB136Q30KP8 78 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 SSX9Q7RTT3 188 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 VKORC1L1Q8N0U8 176 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 ABHD5Q8WTS1 349 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 SPIN2AQ99865 258 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 SPIN2BQ9BPZ2 258 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 COA4Q9NYJ1 87 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 PRR13Q9NZ81 148 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 PRNDQ9UKY0 176 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 ALG5Q9Y673 324 aa12.93□□□□□ -0.34
TRIM54-203ENST00000485306 FCN1O00602 326 aa12.92□□□□□ -0.34
TRIM54-203ENST00000485306 HLA-GP17693 338 aa12.92□□□□□ -0.34
TRIM54-203ENST00000485306 RAB9AP51151 201 aa12.92□□□□□ -0.34
TRIM54-203ENST00000485306 PRSS8Q16651 343 aa12.92□□□□□ -0.34
TRIM54-203ENST00000485306 NMSQ5H8A3 153 aa12.92□□□□□ -0.34
TRIM54-203ENST00000485306 Q6ZNX1 250 aa12.92□□□□□ -0.34
TRIM54-203ENST00000485306 LYZL2Q7Z4W2 148 aa12.92□□□□□ -0.34
TRIM54-203ENST00000485306 ZNF491Q8N8L2 437 aa12.92□□□□□ -0.34
TRIM54-203ENST00000485306 OR11H1Q8NG94 326 aa12.92□□□□□ -0.34
TRIM54-203ENST00000485306 FKBP11Q9NYL4 201 aa12.92□□□□□ -0.34
TRIM54-203ENST00000485306 A0A0B4J293 547 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 A0A1B0GU03 582 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 K7EIL1 84 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 SSNA1O43805 119 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 ACTL6BO94805 426 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 HOXB5P09067 269 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 CRIP2P52943 208 aaPredicted RBP12.91□□□□□ -0.34
TRIM54-203ENST00000485306 RPL8P62917 257 aaKnown RBP12.91□□□□□ -0.34
TRIM54-203ENST00000485306 ECSCRQ19T08 205 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 GGNBP1Q5YKI7 109 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 THOC7Q6I9Y2 204 aaKnown RBP12.91□□□□□ -0.34
TRIM54-203ENST00000485306 ZNF562Q6V9R5 426 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 ZNF429Q86V71 674 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 OR4A16Q8NH70 328 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 MYOZ3Q8TDC0 251 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 GPR146Q96CH1 333 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 CLCC1Q96S66 551 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 KLK15Q9H2R5 256 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 FBXO7Q9Y3I1 522 aa12.91□□□□□ -0.34
TRIM54-203ENST00000485306 A0A1W2PN81 502 aa12.9□□□□□ -0.34
TRIM54-203ENST00000485306 CA2P00918 260 aa12.9□□□□□ -0.34
TRIM54-203ENST00000485306 SULT1A3P0DMM9 295 aa12.9□□□□□ -0.34
TRIM54-203ENST00000485306 SULT1A4P0DMN0 295 aa12.9□□□□□ -0.34
TRIM54-203ENST00000485306 CHRNA7P36544 502 aa12.9□□□□□ -0.34
TRIM54-203ENST00000485306 RUNX1Q01196 453 aa12.9□□□□□ -0.34
TRIM54-203ENST00000485306 AARDQ4LEZ3 155 aa12.9□□□□□ -0.34
TRIM54-203ENST00000485306 AKIRIN2Q53H80 203 aa12.9□□□□□ -0.34
TRIM54-203ENST00000485306 C9orf66Q5T8R8 295 aa12.9□□□□□ -0.34
TRIM54-203ENST00000485306 UXS1Q8NBZ7 420 aa12.9□□□□□ -0.34
TRIM54-203ENST00000485306 OR1N2Q8NGR9 330 aa12.9□□□□□ -0.34
TRIM54-203ENST00000485306 ZNF430Q9H8G1 570 aaPredicted RBP12.9□□□□□ -0.34
TRIM54-203ENST00000485306 TPSG1Q9NRR2 321 aa12.9□□□□□ -0.34
TRIM54-203ENST00000485306 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.9□□□□□ -0.34
TRIM54-203ENST00000485306 FOXA2Q9Y261 457 aaPredicted RBP12.9□□□□□ -0.34
TRIM54-203ENST00000485306 A0A0G2JRQ6 117 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 WI2-2373I1.2A0A1W2PRP0 233 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 C15orf61A6NNL5 157 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 OR8U8P0C7N1 319 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 OR9G9P0C7N8 305 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 EGR2P11161 476 aaPredicted RBP12.89□□□□□ -0.35
TRIM54-203ENST00000485306 FHL3Q13643 280 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 KIAA0141Q14154 515 aaPredicted RBP12.89□□□□□ -0.35
TRIM54-203ENST00000485306 SMCO1Q147U7 214 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 C19orf54Q5BKX5 351 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 OR5B3Q8NH48 314 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 COMMD5Q9GZQ3 224 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 MED28Q9H204 178 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 TMEM14BQ9NUH8 114 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 ZNF257Q9Y2Q1 563 aa12.89□□□□□ -0.35
TRIM54-203ENST00000485306 I3L521 148 aa12.88□□□□□ -0.35
TRIM54-203ENST00000485306 RBMXL2O75526 392 aaKnown RBP12.88□□□□□ -0.35
TRIM54-203ENST00000485306 ADAP1O75689 374 aa12.88□□□□□ -0.35
TRIM54-203ENST00000485306 ZNF616Q08AN1 781 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms