RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 SMIM31A0A1B0GVY4 71 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CGB1A6NKQ9 187 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 A8MWP6 167 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 RGS5O15539 181 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 SCAF4O95104 1147 aaKnown RBP11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 TMEM69Q5SWH9 247 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 BTNL8Q6UX41 500 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 TMEM17Q86X19 198 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 UXS1Q8NBZ7 420 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 ZBTB34Q8NCN2 500 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 OR52B4Q8NGK2 314 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 OR51H1Q8NH63 302 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 CXorf58Q96LI9 332 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 MLXQ9UH92 298 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 KMT2AQ03164 3969 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 KIAA1109Q2LD37 5005 aa11.47□□□□□ -0.57
HLA-DQB1-208ENST00000484729 TRBV7-1A0A0A6YYK4 115 aa11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 ZNF701M0R085 212 aaPredicted RBP11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 RBFOX2O43251 390 aaKnown RBP eCLIP11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 APOA1P02647 267 aa11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 GPR183P32249 361 aa11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 TAS2R31P59538 309 aa11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 OR2B8PP59922 312 aa11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 AADACL3Q5VUY0 350 aa11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 DMBX1Q8NFW5 382 aa11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 OVOL2Q9BRP0 275 aa11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 COMMD5Q9GZQ3 224 aa11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 C6orf62Q9GZU0 229 aaPredicted RBP11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 AUNIPQ9H7T9 357 aa11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 NDUFA13Q9P0J0 144 aa11.46□□□□□ -0.57
HLA-DQB1-208ENST00000484729 RYR1P21817 5038 aa11.46□□□□□ -0.58
HLA-DQB1-208ENST00000484729 DNAH10Q8IVF4 4471 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 TRAV3A0A0B4J244 114 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 IGLC7A0M8Q6 106 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 MEIS3P1A6NDR6 274 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 NUPR2A6NF83 97 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 UPK2O00526 184 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 XRCC3O43542 346 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 S1PR2O95136 353 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 HPRT1P00492 218 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 CLEC3BP05452 202 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 NQO2P16083 231 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 ELK1P19419 428 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 TAS2R20P59543 309 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 HERV-K104P61576 105 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 KLK9Q2XQG4 91 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 TM4SF20Q53R12 229 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 CEMP1Q6PRD7 247 aaPredicted RBP11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 UNQ9165/PRO28630Q6UXU0 137 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 ZNF818PQ6ZRF7 136 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 CMTM3Q96MX0 182 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 TMEM140Q9NV12 185 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 KLK9Q9UKQ9 250 aa11.45□□□□□ -0.58
HLA-DQB1-208ENST00000484729 IGHV3-35A0A0C4DH35 117 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 A0A0J9YWU9 116 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 RPA2P15927 270 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 CBX5P45973 191 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 POU2AF1Q16633 256 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 ANKRD55Q3KP44 614 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 PLET1Q6UQ28 207 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 OR5AP2Q8NGF4 316 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 MCFD2Q8NI22 146 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 ZNF502Q8TBZ5 544 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 GATAD1Q8WUU5 269 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 GGTLC1Q9BX51 225 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 QTRT1Q9BXR0 403 aaKnown RBP11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 IFT46Q9NQC8 304 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 THYN1Q9P016 225 aa11.44□□□□□ -0.58
HLA-DQB1-208ENST00000484729 HECTD4Q9Y4D8 3996 aa11.43□□□□□ -0.58
HLA-DQB1-208ENST00000484729 ERVK-16P61578 105 aa11.43□□□□□ -0.58
HLA-DQB1-208ENST00000484729 ZNF585BQ52M93 769 aa11.43□□□□□ -0.58
HLA-DQB1-208ENST00000484729 RBPMS2Q6ZRY4 209 aaKnown RBP11.43□□□□□ -0.58
HLA-DQB1-208ENST00000484729 OR1L6Q8NGR2 347 aa11.43□□□□□ -0.58
HLA-DQB1-208ENST00000484729 CD300LFQ8TDQ1 290 aa11.43□□□□□ -0.58
HLA-DQB1-208ENST00000484729 MARC2Q969Z3 335 aa11.43□□□□□ -0.58
HLA-DQB1-208ENST00000484729 SRSF8Q9BRL6 282 aaKnown RBP11.43□□□□□ -0.58
HLA-DQB1-208ENST00000484729 PLEKHA2Q9HB19 425 aa11.43□□□□□ -0.58
HLA-DQB1-208ENST00000484729 EHFQ9NZC4 300 aa11.43□□□□□ -0.58
HLA-DQB1-208ENST00000484729 EXTL2Q9UBQ6 330 aa11.43□□□□□ -0.58
HLA-DQB1-208ENST00000484729 UFC1Q9Y3C8 167 aa11.43□□□□□ -0.58
HLA-DQB1-208ENST00000484729 LOC102724200A0A096LPH7 203 aaPredicted RBP11.42□□□□□ -0.58
HLA-DQB1-208ENST00000484729 CYB5BO43169 146 aa11.42□□□□□ -0.58
HLA-DQB1-208ENST00000484729 TGOLN2O43493 480 aa11.42□□□□□ -0.58
HLA-DQB1-208ENST00000484729 SNX29P2Q8IUI4 249 aa11.42□□□□□ -0.58
HLA-DQB1-208ENST00000484729 GDPD1Q8N9F7 314 aa11.42□□□□□ -0.58
HLA-DQB1-208ENST00000484729 OR10W1Q8NGF6 305 aa11.42□□□□□ -0.58
HLA-DQB1-208ENST00000484729 GIMAP1Q8WWP7 306 aa11.42□□□□□ -0.58
HLA-DQB1-208ENST00000484729 BORCS5Q969J3 196 aa11.42□□□□□ -0.58
HLA-DQB1-208ENST00000484729 DGCR14Q96DF8 476 aaKnown RBP11.42□□□□□ -0.58
HLA-DQB1-208ENST00000484729 SLIRPQ9GZT3 109 aaKnown RBP11.42□□□□□ -0.58
HLA-DQB1-208ENST00000484729 COMMD9Q9P000 198 aa11.42□□□□□ -0.58
HLA-DQB1-208ENST00000484729 TRAV25A0A0B4J276 109 aa11.41□□□□□ -0.58
HLA-DQB1-208ENST00000484729 CTDSP2O14595 271 aa11.41□□□□□ -0.58
HLA-DQB1-208ENST00000484729 RLN1P04808 185 aa11.41□□□□□ -0.58
HLA-DQB1-208ENST00000484729 OR13C7P0DN81 318 aa11.41□□□□□ -0.58
HLA-DQB1-208ENST00000484729 PTBP1P26599 531 aaKnown RBP eCLIP11.41□□□□□ -0.58
HLA-DQB1-208ENST00000484729 THOC7Q6I9Y2 204 aaKnown RBP11.41□□□□□ -0.58
HLA-DQB1-208ENST00000484729 HINT2Q9BX68 163 aa11.41□□□□□ -0.58
HLA-DQB1-208ENST00000484729 MIXL1Q9H2W2 232 aa11.41□□□□□ -0.58
HLA-DQB1-208ENST00000484729 MRPL27Q9P0M9 148 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms