RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 RORCP51449 518 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 SYNJ2BPP57105 145 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 SSBP2P81877 361 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-215ENST00000484203 EIF4EBP1Q13541 118 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-215ENST00000484203 DYRK1AQ13627 763 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 EXOSC2Q13868 293 aaKnown RBP4.71□□□□□ -1.66
PTCD3-215ENST00000484203 POU2AF1Q16633 256 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 KLK9Q2XQG4 91 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 C15orf32Q32M92 178 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 FAM106AQ4KMX7 169 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 AADACL3Q5VUY0 350 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 OR4A47Q6IF82 309 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 MZT2AQ6P582 158 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 IDO2Q6ZQW0 420 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 TMEM17Q86X19 198 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 SPAG16Q8N0X2 631 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 PUSL1Q8N0Z8 303 aaKnown RBP4.71□□□□□ -1.66
PTCD3-215ENST00000484203 SAMD12Q8N8I0 201 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 OR5H6Q8NGV6 325 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 OR5H2Q8NGV7 314 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 OR6F1Q8NGZ6 308 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 CASTOR1Q8WTX7 329 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 EEF1AKMT3Q96AZ1 226 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 YIPF6Q96EC8 236 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 C5orf30Q96GV9 206 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 TSC22D3Q99576 134 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 HRASLSQ9HDD0 168 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 GAR1Q9NY12 217 aaKnown RBP4.71□□□□□ -1.66
PTCD3-215ENST00000484203 TECRQ9NZ01 308 aaKnown RBP4.71□□□□□ -1.66
PTCD3-215ENST00000484203 EHFQ9NZC4 300 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 KLK9Q9UKQ9 250 aa4.71□□□□□ -1.66
PTCD3-215ENST00000484203 ELF5Q9UKW6 265 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-215ENST00000484203 ZNF785A8K8V0 405 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 LGALS9O00182 355 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 SNAPC5O75971 98 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 ATG12O94817 140 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 SCGB1D2O95969 90 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 TBPP20226 339 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 F2RP25116 425 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 PSMB6P28072 239 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 TAS2R20P59543 309 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 TSPAN5P62079 268 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 RPL30P62888 115 aaKnown RBP4.7□□□□□ -1.66
PTCD3-215ENST00000484203 MRGPRG-AS1Q2M3A8 158 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 ANKRD55Q3KP44 614 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 GPHB5Q86YW7 130 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 GVQW1Q8N7I0 195 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 DMBX1Q8NFW5 382 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 OR5B3Q8NH48 314 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 MARC2Q969Z3 335 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 MOB3AQ96BX8 217 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 RBMXL1Q96E39 390 aaKnown RBP4.7□□□□□ -1.66
PTCD3-215ENST00000484203 FYTTD1Q96QD9 318 aaKnown RBP4.7□□□□□ -1.66
PTCD3-215ENST00000484203 QTRT1Q9BXR0 403 aaKnown RBP4.7□□□□□ -1.66
PTCD3-215ENST00000484203 TUBA4BQ9H853 241 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 PALMDQ9NP74 551 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 CCL28Q9NRJ3 127 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 SLC2A8Q9NY64 477 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 RABL2AQ9UBK7 228 aaPredicted RBP4.7□□□□□ -1.66
PTCD3-215ENST00000484203 ANAPC10Q9UM13 185 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 RABL2BQ9UNT1 228 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 COL7A1Q02388 2944 aa4.7□□□□□ -1.66
PTCD3-215ENST00000484203 SORL1Q92673 2214 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 TRIM64CA6NLI5 447 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 TEX22C9J3V5 150 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 GPR31O00270 319 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 UPK2O00526 184 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 TNFSF12O43508 249 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 B3GALNT1O75752 331 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 OR2J3O76001 311 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 IFNA6P05013 189 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 IL6RP08887 468 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-215ENST00000484203 FRMD6-AS1P0C7T7 363 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 TRAPPC2P0DI81 140 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 TRAPPC2BP0DI82 140 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 MYOD1P15172 320 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 RPA2P15927 270 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 CTRB1P17538 263 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 PTBP1P26599 531 aaKnown RBP eCLIP4.69□□□□□ -1.66
PTCD3-215ENST00000484203 GNRHRP30968 328 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 RCVRNP35243 200 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 UCP3P55916 312 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 FXYD4P59646 89 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 OR2B8PP59922 312 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 OR2B11Q5JQS5 317 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 CTRB2Q6GPI1 263 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 C11orf87Q6NUJ2 197 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 SPSB3Q6PJ21 355 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 SLC16A13Q7RTY0 426 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 SLC38A6Q8IZM9 456 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 VKORC1L1Q8N0U8 176 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 OR1L8Q8NGR8 309 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 OR51H1Q8NH63 302 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 VN1R17PQ8TDU5 208 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 DYNLRB2Q8TF09 96 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 DGCR14Q96DF8 476 aaKnown RBP4.69□□□□□ -1.66
PTCD3-215ENST00000484203 ZNF486Q96H40 463 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-215ENST00000484203 TMEM56Q96MV1 263 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 ZNF2Q9BSG1 426 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-215ENST00000484203 FUNDC2Q9BWH2 189 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms