RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TEX46H3BTG2 121 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 H7C2Y5 167 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 J3QLI3 93 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 J3QR06 171 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 PROP1O75360 226 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 MMP23AO75900 390 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 RBP4P02753 201 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 PPIAL4GP0DN37 164 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 IGHV1-8P0DP01 117 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 SPP1P10451 314 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 CAMLGP49069 296 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 RAB13P51153 203 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 PAX9P55771 341 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 BRWD1-AS2P59051 145 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 SPCS3P61009 180 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 ATP6V1FQ16864 119 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 UQCC3Q6UW78 93 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 IL34Q6ZMJ4 242 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 ZNF833PQ6ZTB9 187 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 SSX9Q7RTT3 188 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 ODF3L1Q8IXM7 274 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 EIF4E3Q8N5X7 224 aaKnown RBP5.6□□□□□ -1.51
BRCA1-216ENST00000484087 HSD17B11Q8NBQ5 300 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 OR52E5Q8NH55 327 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 TMEM158Q8WZ71 300 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 DDB2Q92466 427 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 LHX4Q969G2 390 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 MARC2Q969Z3 335 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 PINX1Q96BK5 328 aaKnown RBP5.6□□□□□ -1.51
BRCA1-216ENST00000484087 ZNF251Q9BRH9 671 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 KRTAP4-7Q9BYR0 210 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 TMEM133Q9H2Q1 129 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 HIPK2Q9H2X6 1198 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 ENY2Q9NPA8 101 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 TMEM140Q9NV12 185 aa5.6□□□□□ -1.51
BRCA1-216ENST00000484087 AMMECR1Q9Y4X0 333 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-216ENST00000484087 TRIM77I1YAP6 450 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 SHOXO15266 292 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 ENSAO43768 121 aaKnown RBP5.59□□□□□ -1.51
BRCA1-216ENST00000484087 TOX4O94842 621 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 TMEM50AO95807 157 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 LIPFP07098 398 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 FGF2P09038 288 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 METTL15P1P0C7V9 234 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 F2RL1P55085 397 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 LINC00205P59089 165 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 HILS1P60008 231 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 RAB2AP61019 212 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 TMEM267Q0VDI3 215 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-216ENST00000484087 DEFB112Q30KQ8 113 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 TOR2AQ5JU69 321 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 AKR1C8PQ5T2L2 129 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 C8orf86Q6ZUL3 223 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 VMO1Q7Z5L0 202 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 ZNF429Q86V71 674 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 TGIF2LXQ8IUE1 241 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 ABHD12Q8N2K0 398 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 STPG2Q8N412 459 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 ZNF383Q8NA42 475 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 OR10P1Q8NGE3 313 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 OR2G3Q8NGZ4 309 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 VSTM2AQ8TAG5 236 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 C8orf46Q8TAG6 207 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 OSR1Q8TAX0 266 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-216ENST00000484087 ZNF596Q8TC21 504 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 BSCL2Q96G97 398 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-216ENST00000484087 FANCD2OSQ96PS1 177 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 MS4A7Q9GZW8 240 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-216ENST00000484087 SIRPDQ9H106 197 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 WFDC1Q9HC57 220 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 PARP11Q9NR21 331 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 FKBP11Q9NYL4 201 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 PRNDQ9UKY0 176 aa5.59□□□□□ -1.51
BRCA1-216ENST00000484087 A0A0U1RQK1 487 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 CENPVL3A0A0U1RRI6 287 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 OR9G9P0C7N8 305 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 CT45A6P0DMU7 189 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 CT45A5P0DMU8 189 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 CT45A7P0DMV0 189 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 ZP3P21754 424 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 GATA3P23771 443 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 ATP6V0CP27449 155 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 MC5RP33032 325 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 HOXA1P49639 335 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-216ENST00000484087 DLX6P56179 175 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 OR2B8PP59922 312 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 RAB11AP62491 216 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 SLC38A11Q08AI6 406 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 ZNF616Q08AN1 781 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 POU2AF1Q16633 256 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 PXDC1Q5TGL8 231 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 OR8G2PQ6IF36 304 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 TMEM14EPQ6UXP3 125 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 Q6ZRG5 221 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 PDPNQ86YL7 162 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 CCDC28AQ8IWP9 274 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 COMMD1Q8N668 190 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 Q8N7P7 452 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 OR4C13Q8NGP0 309 aa5.58□□□□□ -1.52
BRCA1-216ENST00000484087 OR13D1Q8NGV5 346 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms