RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 BAXQ07812 192 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 HES1Q14469 280 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 MMDQ15546 238 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 PPP1R27Q86WC6 154 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 MMD2Q8IY49 270 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 ZNF680Q8NEM1 530 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 OR10W1Q8NGF6 305 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 STOML3Q8TAV4 291 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 ST8SIA2Q92186 375 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 CLCC1Q96S66 551 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 HINT2Q9BX68 163 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 ZNF471Q9BX82 626 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-226ENST00000483656 ARV1Q9H2C2 271 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 HEYLQ9NQ87 328 aaPredicted RBP8.05□□□□□ -1.12
HDAC6-226ENST00000483656 CACFD1Q9UGQ2 172 aa8.05□□□□□ -1.12
HDAC6-226ENST00000483656 STRAPQ9Y3F4 350 aaKnown RBP8.05□□□□□ -1.12
HDAC6-226ENST00000483656 INS-IGF2F8WCM5 200 aa8.04□□□□□ -1.12
HDAC6-226ENST00000483656 SMAD7O15105 426 aaKnown RBP8.04□□□□□ -1.12
HDAC6-226ENST00000483656 TMEM11P17152 192 aa8.04□□□□□ -1.12
HDAC6-226ENST00000483656 BRS3P32247 399 aa8.04□□□□□ -1.12
HDAC6-226ENST00000483656 MAS1LP35410 378 aa8.04□□□□□ -1.12
HDAC6-226ENST00000483656 HOXA1P49639 335 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-226ENST00000483656 COMPP49747 757 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-226ENST00000483656 UBA52P62987 128 aaKnown RBP8.04□□□□□ -1.12
HDAC6-226ENST00000483656 EXOSC2Q13868 293 aaKnown RBP8.04□□□□□ -1.12
HDAC6-226ENST00000483656 C5orf64Q2M2E5 130 aa8.04□□□□□ -1.12
HDAC6-226ENST00000483656 BSXQ3C1V8 233 aa8.04□□□□□ -1.12
HDAC6-226ENST00000483656 BCL6BQ8N143 479 aaPredicted RBP8.04□□□□□ -1.12
HDAC6-226ENST00000483656 STPG2Q8N412 459 aa8.04□□□□□ -1.12
HDAC6-226ENST00000483656 TMEM217Q8N7C4 229 aa8.04□□□□□ -1.12
HDAC6-226ENST00000483656 OR5C1Q8NGR4 320 aa8.04□□□□□ -1.12
HDAC6-226ENST00000483656 COMMD5Q9GZQ3 224 aa8.04□□□□□ -1.12
HDAC6-226ENST00000483656 SVEP1Q4LDE5 3571 aa8.04□□□□□ -1.12
HDAC6-226ENST00000483656 FLNAP21333 2647 aaKnown RBP8.03□□□□□ -1.12
HDAC6-226ENST00000483656 ABCA1O95477 2261 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 ZNF469Q96JG9 3925 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-226ENST00000483656 IGLC7A0M8Q6 106 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 PRSS46E5RG02 174 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 LY86O95711 162 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 CA2P00918 260 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 FAM106CPP0CH98 169 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 RNASE2P10153 161 aaKnown RBP8.03□□□□□ -1.12
HDAC6-226ENST00000483656 RPL27AP46776 148 aaKnown RBP8.03□□□□□ -1.12
HDAC6-226ENST00000483656 WT1-ASQ06250 92 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 CLINT1Q14677 625 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 TNXAQ16473 311 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 ZNF767PQ75MW2 155 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 STX12Q86Y82 276 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 Q8N9W7 124 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 UBAC2Q8NBM4 344 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 OR1S2Q8NGQ3 325 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 HIPK2Q9H2X6 1198 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 PLEKHA3Q9HB20 300 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 PLA2G2EQ9NZK7 142 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 PLXNB1O43157 2135 aa8.03□□□□□ -1.12
HDAC6-226ENST00000483656 MDFIC2A0A1B0GVS7 189 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 TEX22C9J3V5 150 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 JTBO76095 146 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 IFNA10P01566 189 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 TPT1P13693 172 aaKnown RBP8.02□□□□□ -1.13
HDAC6-226ENST00000483656 GNB1P62873 340 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 SLC38A11Q08AI6 406 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 OR8G2PQ6IF36 304 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 ALKAL2Q6UX46 152 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 BAP18Q8IXM2 172 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 SLC24A4Q8NFF2 622 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 ATP5SQ99766 215 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 SSX3Q99909 188 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 GINS3Q9BRX5 216 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 ENY2Q9NPA8 101 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 KIAA1456Q9P272 454 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 PAIP2BQ9ULR5 123 aaKnown RBP8.02□□□□□ -1.13
HDAC6-226ENST00000483656 RFNGQ9Y644 331 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 CSPG4Q6UVK1 2322 aa8.02□□□□□ -1.13
HDAC6-226ENST00000483656 A0A1W2PN81 502 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 RPS10-NUDT3A0A1W2PQS6 291 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 A6NDX4 124 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 NCBP2LA6PVI3 153 aaKnown RBP8.01□□□□□ -1.13
HDAC6-226ENST00000483656 IFNA7P01567 189 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 FBP1P09467 338 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 AREGP15514 252 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 NPY1RP25929 384 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 CHRNA7P36544 502 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 BPIFB3P59826 476 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 CX3CL1P78423 397 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 NDPQ00604 133 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 PLGLAQ15195 96 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 LRRC75BQ2VPJ9 315 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 DEFB112Q30KQ8 113 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 C2orf83Q53S99 150 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 PVRIGQ6DKI7 326 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 ETV3LQ6ZN32 361 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 C19orf35Q6ZS72 473 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 C9orf139Q6ZV77 190 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 NANPQ8TBE9 248 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 SCARB1Q8WTV0 552 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 SRSF12Q8WXF0 261 aaKnown RBP8.01□□□□□ -1.13
HDAC6-226ENST00000483656 RBM14Q96PK6 669 aaKnown RBP8.01□□□□□ -1.13
HDAC6-226ENST00000483656 UBQLN2Q9UHD9 624 aa8.01□□□□□ -1.13
HDAC6-226ENST00000483656 ITGB1BP2Q9UKP3 347 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms