RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 TFF3Q07654 80 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 MORN2Q502X0 79 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 TMEM108Q6UXF1 575 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 TMEM251Q8N6I4 163 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 C5orf30Q96GV9 206 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 KCNS1Q96KK3 526 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 GP6Q9HCN6 339 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 TRAV38-1A0A0B4J264 116 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 GAGE12BA1L429 117 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 FAM90A26D6RGX4 464 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 SAP30O75446 220 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 S1PR2O95136 353 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 NUDT3O95989 172 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 ZNF816Q0VGE8 651 aaPredicted RBP10.34□□□□□ -0.75
CCDC78-213ENST00000482878 LTC4SQ16873 150 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 CDC42EP3Q9UKI2 254 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 TIMM9Q9Y5J7 89 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 ARL2-SNX15V9GYD0 113 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 IGHV2-26A0A0B4J1V2 119 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 IGLC7A0M8Q6 106 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 C9orf172C9J069 976 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 PRRX1P54821 245 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 HOXA4Q00056 320 aaPredicted RBP10.34□□□□□ -0.75
CCDC78-213ENST00000482878 ZNF808Q8N4W9 903 aaPredicted RBP10.34□□□□□ -0.75
CCDC78-213ENST00000482878 OCC1Q8TAD7 63 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 ZC2HC1AQ96GY0 325 aa10.34□□□□□ -0.75
CCDC78-213ENST00000482878 INTS1Q8N201 2190 aaKnown RBP10.33□□□□□ -0.76
CCDC78-213ENST00000482878 A0A1W2PS18 150 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 ZNF324O75467 553 aaPredicted RBP10.33□□□□□ -0.76
CCDC78-213ENST00000482878 RAC2P15153 192 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 ALKBH6Q3KRA9 238 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 OR1L1Q8NH94 360 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 ZDHHC16Q969W1 377 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 RTL8AQ9BWD3 113 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 QTRT1Q9BXR0 403 aaKnown RBP10.33□□□□□ -0.76
CCDC78-213ENST00000482878 PMS2P5A8MQ11 134 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 NKX2-8O15522 239 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 HSBP1O75506 76 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 CELA3BP08861 270 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 TIMP3P35625 211 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 ZNF83P51522 516 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 EDDM3BP56851 147 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 RPEL1Q2QD12 228 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 MRPL54Q6P161 138 aaKnown RBP10.33□□□□□ -0.76
CCDC78-213ENST00000482878 OR2D2Q9H210 308 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 IL36BQ9NZH7 164 aa10.33□□□□□ -0.76
CCDC78-213ENST00000482878 TMEM265A0A087WTH1 108 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 SCO2A0A1W2PP80 73 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 PSPNO60542 156 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 LYZL6O75951 148 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 CA2P00918 260 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 GRPP07492 148 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 P0C879 139 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 SP9P0CG40 484 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 ESDP10768 282 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 BRWD1-AS2P59051 145 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 Q0VG73 95 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 OR5B3Q8NH48 314 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 CLUHP3Q96NS8 147 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 DCHS1Q96JQ0 3298 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 ANKRD11Q6UB99 2663 aaPredicted RBP10.32□□□□□ -0.76
CCDC78-213ENST00000482878 M0R1X1 148 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 ZG16O60844 167 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 MEOX1P50221 254 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 MRPL49Q13405 166 aaKnown RBP10.32□□□□□ -0.76
CCDC78-213ENST00000482878 SPINK9Q5DT21 86 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 GCSAMLQ5JQS6 135 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 MMD2Q8IY49 270 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 ZNF645Q8N7E2 425 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 CLEC7AQ9BXN2 247 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 SERTAD4Q9NUC0 356 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 LRRC30A6NM36 301 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 MGST1P10620 155 aaKnown RBP10.32□□□□□ -0.76
CCDC78-213ENST00000482878 LINC00205P59089 165 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 ZNF146Q15072 292 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 OR10P1Q8NGE3 313 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 TMEM147Q9BVK8 224 aa10.32□□□□□ -0.76
CCDC78-213ENST00000482878 C17orf98A8MV24 154 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 PMCHL1Q16048 86 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 POLDIP2Q9Y2S7 368 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 SPG11Q96JI7 2443 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 C12orf77C9JDV5 145 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 C17orf112F2Z3M2 114 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 OR7C2O60412 319 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 PEAR1Q5VY43 1037 aaPredicted RBP10.31□□□□□ -0.76
CCDC78-213ENST00000482878 Q8IYB0 196 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 GMPPAQ96IJ6 420 aaPredicted RBP10.31□□□□□ -0.76
CCDC78-213ENST00000482878 ZFHX4Q86UP3 3567 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 ATMQ13315 3056 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 TRAV9-2A0A087WT02 112 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 TFF1P04155 84 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 IGLL1P15814 213 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 PNKDQ8N490 385 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 AP1S3Q96PC3 154 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 NPCDR1Q9BY65 106 aa10.31□□□□□ -0.76
CCDC78-213ENST00000482878 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.31□□□□□ -0.76
CCDC78-213ENST00000482878 MED12LQ86YW9 2145 aa10.3□□□□□ -0.76
CCDC78-213ENST00000482878 MUC21A0A0G2JKD1 596 aa10.3□□□□□ -0.76
CCDC78-213ENST00000482878 MUC21A0A140T8X8 626 aa10.3□□□□□ -0.76
CCDC78-213ENST00000482878 M0R2Z0 102 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms