RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 STAG3L2P0CL84 134 aa9.67□□□□□ -0.86
DDX39B-219ENST00000481456 STAG3L3P0CL85 134 aa9.67□□□□□ -0.86
DDX39B-219ENST00000481456 CA7P43166 264 aa9.67□□□□□ -0.86
DDX39B-219ENST00000481456 PPP1R32Q7Z5V6 425 aa9.67□□□□□ -0.86
DDX39B-219ENST00000481456 SEMA5BQ9P283 1151 aa9.67□□□□□ -0.86
DDX39B-219ENST00000481456 DENND4AQ7Z401 1863 aa9.67□□□□□ -0.86
DDX39B-219ENST00000481456 SH2D7A6NKC9 451 aaPredicted RBP9.66□□□□□ -0.86
DDX39B-219ENST00000481456 UMODP07911 640 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 RPL8P62917 257 aaKnown RBP9.66□□□□□ -0.86
DDX39B-219ENST00000481456 TBR1Q16650 682 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 TMEM177Q53S58 311 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 Q6ZRM9 215 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 DEFB124Q8NES8 71 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 DERL1Q9BUN8 251 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 COL25A1Q9BXS0 654 aaPredicted RBP9.66□□□□□ -0.86
DDX39B-219ENST00000481456 RNASE7Q9H1E1 156 aaKnown RBP9.66□□□□□ -0.86
DDX39B-219ENST00000481456 LPAR2Q9HBW0 351 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 OR4C46A6NHA9 309 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 FAM90A9PA6NNJ1 464 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 RELBQ01201 579 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 PRNTQ86SH4 94 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 RAB1CQ92928 201 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 HIGD1AQ9Y241 93 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 NPIPB11E5RHQ5 1161 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 ZNF726P1Q15940 193 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 FAM214BQ7L5A3 538 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 C5orf17Q8NAS9 161 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 PEF1Q9UBV8 284 aaKnown RBP9.66□□□□□ -0.86
DDX39B-219ENST00000481456 TRAV9-2A0A087WT02 112 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 IGLV3-1P01715 115 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 LIPFP07098 398 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 PMS2CLQ68D20 193 aa9.66□□□□□ -0.86
DDX39B-219ENST00000481456 TYMSP04818 313 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 UQCRFS1P47985 274 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 C1orf210Q8IVY1 113 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 RASL11BQ9BPW5 248 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 SNRNP200O75643 2136 aaKnown RBP9.65□□□□□ -0.86
DDX39B-219ENST00000481456 C9JCJ5 164 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 GDF9O60383 454 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 ARL6IP6Q8N6S5 226 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 C20orf144Q9BQM9 153 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 DEPPQ9NTK1 212 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 IDI2-AS1Q9NZ38 188 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 ZNF207O43670 478 aaKnown RBP9.65□□□□□ -0.86
DDX39B-219ENST00000481456 PLAUP00749 431 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 PRSS1P07477 247 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 TREML4Q6UXN2 200 aa9.65□□□□□ -0.86
DDX39B-219ENST00000481456 EFNB3Q15768 340 aa9.65□□□□□ -0.87
DDX39B-219ENST00000481456 FBLN7Q53RD9 439 aa9.65□□□□□ -0.87
DDX39B-219ENST00000481456 FANCMQ8IYD8 2048 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 CABIN1Q9Y6J0 2220 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 SFTPCP11686 197 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 GGNQ86UU5 652 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 EP300Q09472 2414 aaPredicted RBP9.64□□□□□ -0.87
DDX39B-219ENST00000481456 M0R296 226 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 OR9G9P0C7N8 305 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 PRRX1P54821 245 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 HES3Q5TGS1 186 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 LEAP2Q969E1 77 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 LY96Q9Y6Y9 160 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 IQCF6A8MYZ5 107 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 CELA3AP09093 270 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 SAPCD1Q5SSQ6 148 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.64□□□□□ -0.87
DDX39B-219ENST00000481456 RPEQ96AT9 228 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 SMIM12Q96EX1 92 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 IGKV1-6A0A0C4DH72 117 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 PATE3B3GLJ2 98 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 PEX7O00628 323 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 NUDT3O95989 172 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 CLDN18P56856 261 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 TRIP6Q15654 476 aaKnown RBP9.64□□□□□ -0.87
DDX39B-219ENST00000481456 IFI27L2Q9H2X8 130 aa9.64□□□□□ -0.87
DDX39B-219ENST00000481456 KIF26AQ9ULI4 1882 aaPredicted RBP9.64□□□□□ -0.87
DDX39B-219ENST00000481456 NIT1Q86X76 327 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 GGTLC1Q9BX51 225 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 SOX21Q9Y651 276 aaPredicted RBP9.63□□□□□ -0.87
DDX39B-219ENST00000481456 KIAA1549LQ6ZVL6 1849 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 FABP2P12104 132 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 REG1BP48304 166 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 NMUP48645 174 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 TMEM30BQ3MIR4 351 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 OR10AG1Q8NH19 301 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 OR52E5Q8NH55 327 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 TNFRSF19Q9NS68 423 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 ST6GALNAC6Q969X2 333 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 RBFOX2O43251 390 aaKnown RBP eCLIP9.63□□□□□ -0.87
DDX39B-219ENST00000481456 FOXA3P55318 350 aaPredicted RBP9.63□□□□□ -0.87
DDX39B-219ENST00000481456 ARF6P62330 175 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 TMEM144Q7Z5S9 345 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 SSC4DQ8WTU2 575 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 CCL17Q92583 94 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 CCL13Q99616 98 aa9.63□□□□□ -0.87
DDX39B-219ENST00000481456 LOC389332A0A1B0GUA5 103 aa9.62□□□□□ -0.87
DDX39B-219ENST00000481456 C15orf61A6NNL5 157 aa9.62□□□□□ -0.87
DDX39B-219ENST00000481456 LHX2P50458 406 aa9.62□□□□□ -0.87
DDX39B-219ENST00000481456 GP6Q9HCN6 339 aa9.62□□□□□ -0.87
DDX39B-219ENST00000481456 AHCTF1Q8WYP5 2266 aa9.62□□□□□ -0.87
DDX39B-219ENST00000481456 IGKV3D-15A0A087WSY6 115 aa9.62□□□□□ -0.87
DDX39B-219ENST00000481456 RPL30P62888 115 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms