RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 DDB2Q92466 427 aa6.6□□□□□ -1.35
USP54-212ENST00000480210 RASL11BQ9BPW5 248 aa6.6□□□□□ -1.35
USP54-212ENST00000480210 C16orf95Q9H693 158 aa6.6□□□□□ -1.35
USP54-212ENST00000480210 BEX1Q9HBH7 125 aa6.6□□□□□ -1.35
USP54-212ENST00000480210 TREM1Q9NP99 234 aa6.6□□□□□ -1.35
USP54-212ENST00000480210 LIN7CQ9NUP9 197 aaKnown RBP6.6□□□□□ -1.35
USP54-212ENST00000480210 TNFSF18Q9UNG2 199 aa6.6□□□□□ -1.35
USP54-212ENST00000480210 GPR132Q9UNW8 380 aa6.6□□□□□ -1.35
USP54-212ENST00000480210 C14orf166Q9Y224 244 aaKnown RBP6.6□□□□□ -1.35
USP54-212ENST00000480210 NIPBLQ6KC79 2804 aaeCLIP6.6□□□□□ -1.35
USP54-212ENST00000480210 IGHV3-72A0A0B4J1Y9 119 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 CXorf65A6NEN9 183 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 NCBP2LA6PVI3 153 aaKnown RBP6.59□□□□□ -1.35
USP54-212ENST00000480210 NBR2O15453 112 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 KCNAB3O43448 404 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 NDUFA3O95167 84 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 HOXB5P09067 269 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 LINC00614P0C842 121 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 HOXA5P20719 270 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 F2RP25116 425 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 F2RL1P55085 397 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 NHLH2Q02577 135 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 VMA21Q3ZAQ7 101 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 BAP18Q8IXM2 172 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 Q8N2B8 174 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 TEX45Q8NA69 505 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 OR51S1Q8NGJ8 323 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 OR2T6Q8NHC8 308 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 R3HDM4Q96D70 268 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 GGACTQ9BVM4 153 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 ZNF471Q9BX82 626 aaPredicted RBP6.59□□□□□ -1.35
USP54-212ENST00000480210 PLEKHA2Q9HB19 425 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 TNFRSF19Q9NS68 423 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 TNCP24821 2201 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 PLXNB1O43157 2135 aa6.59□□□□□ -1.35
USP54-212ENST00000480210 LINC00473A8K010 186 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 RRHO14718 337 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 MPPED1O15442 326 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 FCGR3BO75015 233 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 SIX6O95475 246 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 RAB5AP20339 215 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 CD24P25063 80 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 DDTP30046 118 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 COMPP49747 757 aaPredicted RBP6.58□□□□□ -1.36
USP54-212ENST00000480210 TAS2R31P59538 309 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 GAGE1Q13065 139 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 COTL1Q14019 142 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 MMDQ15546 238 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 SLC16A13Q7RTY0 426 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 C5orf56Q8N8D9 126 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 Q8N9W7 124 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 LFNGQ8NES3 379 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 OR5M8Q8NGP6 311 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 OR4A5Q8NH83 315 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 MARCH1Q8TCQ1 289 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 PCNPQ8WW12 178 aaKnown RBP6.58□□□□□ -1.36
USP54-212ENST00000480210 HARBI1Q96MB7 349 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 DUX5Q96PT3 197 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 NEU1Q99519 415 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 PBDC1Q9BVG4 233 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 GPR61Q9BZJ8 451 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 SLC2A9Q9NRM0 540 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 ZNF580Q9UK33 172 aa6.58□□□□□ -1.36
USP54-212ENST00000480210 SETD2Q9BYW2 2564 aaPredicted RBP6.58□□□□□ -1.36
USP54-212ENST00000480210 TEX13DA0A0J9YY54 714 aaPredicted RBP6.57□□□□□ -1.36
USP54-212ENST00000480210 CLPSL1A2RUU4 121 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 GOSR2O14653 212 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 TCAPO15273 167 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 IGHG2P01859 326 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 HLA-DRB1P01911 266 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 METTL15P1P0C7V9 234 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 NQO2P16083 231 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 PIGPP57054 158 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 UBE2KP61086 200 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 RPL30P62888 115 aaKnown RBP6.57□□□□□ -1.36
USP54-212ENST00000480210 PSG5Q15238 335 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 POU2AF1Q16633 256 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 C5orf64Q2M2E5 130 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 Q6ZSV7 163 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 TBC1D26Q86UD7 250 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 TMEM219Q86XT9 240 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 FOXRED2Q8IWF2 684 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 SGPP2Q8IWX5 399 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 FAM71E2Q8N5Q1 922 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 HSD17B11Q8NBQ5 300 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 OR13C8Q8NGS7 320 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 C5orf30Q96GV9 206 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 SMIM8Q96KF7 97 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 PHB2Q99623 299 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 PARP11Q9NR21 331 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 CACFD1Q9UGQ2 172 aa6.57□□□□□ -1.36
USP54-212ENST00000480210 A0A0B4J2A0 478 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 C3orf85A0A1B0GTC6 90 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 A0A1B0GW64 132 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 H0Y980 276 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 TNFSF12O43508 249 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 CHST1O43916 411 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 FBXO24O75426 580 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 IGKV1-16P04430 117 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 RLN1P04808 185 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms