RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 RIMS4Q9H426 269 aaPredicted RBP8.1□□□□□ -1.11
USP11-208ENST00000480104 H3BMM0 161 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 BET1O15155 118 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 HBE1P02100 147 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 DEFB130BP0DP73 79 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 DEFB130AP0DP74 79 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 HTR2CP28335 458 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 ESRGQ1W209 222 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 OGFRL1Q5TC84 451 aaPredicted RBP8.09□□□□□ -1.11
USP11-208ENST00000480104 SLC25A24Q6NUK1 477 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 DHFR2Q86XF0 187 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 DCANP1Q8TF63 244 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 GINS3Q9BRX5 216 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 AK3Q9UIJ7 227 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 MGAT4AQ9UM21 535 aa8.09□□□□□ -1.11
USP11-208ENST00000480104 K7EIM0 57 aa8.08□□□□□ -1.12
USP11-208ENST00000480104 CYB5BO43169 146 aa8.08□□□□□ -1.12
USP11-208ENST00000480104 CELP19835 753 aa8.08□□□□□ -1.12
USP11-208ENST00000480104 SERPINB10P48595 397 aa8.08□□□□□ -1.12
USP11-208ENST00000480104 GTF2A1P52655 376 aaPredicted RBP8.08□□□□□ -1.12
USP11-208ENST00000480104 LHFPL3Q86UP9 236 aa8.08□□□□□ -1.12
USP11-208ENST00000480104 ADGRG5Q8IZF4 528 aa8.08□□□□□ -1.12
USP11-208ENST00000480104 SYS1Q8N2H4 156 aa8.08□□□□□ -1.12
USP11-208ENST00000480104 EXOGQ9Y2C4 368 aaKnown RBP8.08□□□□□ -1.12
USP11-208ENST00000480104 RBM7Q9Y580 266 aaKnown RBP8.08□□□□□ -1.12
USP11-208ENST00000480104 HELTA6NFD8 242 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 RS1O15537 224 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 DCTN3O75935 186 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 SRMP19623 302 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 PRDX6P30041 224 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 IGSF11Q5DX21 431 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 OR10K2Q6IF99 312 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 KCTD9Q7L273 389 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 DEFB107AQ8IZN7 70 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 OR10W1Q8NGF6 305 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 OR8J1Q8NGP2 316 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 GGHQ92820 318 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 MRPL48Q96GC5 212 aaKnown RBP8.07□□□□□ -1.12
USP11-208ENST00000480104 C12orf4Q9NQ89 552 aa8.07□□□□□ -1.12
USP11-208ENST00000480104 MRPS7Q9Y2R9 242 aaKnown RBP8.07□□□□□ -1.12
USP11-208ENST00000480104 TRDCB7Z8K6 153 aa8.06□□□□□ -1.12
USP11-208ENST00000480104 ATP5G1P05496 136 aa8.06□□□□□ -1.12
USP11-208ENST00000480104 ATP5G3P48201 142 aa8.06□□□□□ -1.12
USP11-208ENST00000480104 GBX2P52951 348 aaPredicted RBP8.06□□□□□ -1.12
USP11-208ENST00000480104 RPL30P62888 115 aaKnown RBP8.06□□□□□ -1.12
USP11-208ENST00000480104 RRN3P1Q2M238 152 aa8.06□□□□□ -1.12
USP11-208ENST00000480104 ZNF773Q6PK81 442 aa8.06□□□□□ -1.12
USP11-208ENST00000480104 TOMM20LQ6UXN7 152 aa8.06□□□□□ -1.12
USP11-208ENST00000480104 Q6ZSA8 131 aa8.06□□□□□ -1.12
USP11-208ENST00000480104 NFE4Q86UQ8 179 aa8.06□□□□□ -1.12
USP11-208ENST00000480104 OR4S2Q8NH73 311 aa8.06□□□□□ -1.12
USP11-208ENST00000480104 NXF2Q9GZY0 626 aaKnown RBP8.06□□□□□ -1.12
USP11-208ENST00000480104 PLEKHJ1Q9NW61 149 aa8.06□□□□□ -1.12
USP11-208ENST00000480104 CKLFQ9UBR5 152 aa8.06□□□□□ -1.12
USP11-208ENST00000480104 LPAP08519 4548 aa8.06□□□□□ -1.12
USP11-208ENST00000480104 LYRM9A8MSI8 78 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 IGKV3-20P01619 116 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 C1QBP02746 253 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 OR13C7P0DN81 318 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 HLA-DRB4P13762 266 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 MS4A2Q01362 244 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 MRPL28Q13084 256 aaKnown RBP8.05□□□□□ -1.12
USP11-208ENST00000480104 YIF1BQ5BJH7 314 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 XAF1Q6GPH4 301 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 ARHGAP24Q8N264 748 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 OR4A4PQ8NGN8 299 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 OR10J5Q8NHC4 309 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 NTN5Q8WTR8 489 aaPredicted RBP8.05□□□□□ -1.12
USP11-208ENST00000480104 FCGR1BQ92637 280 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 TMEM231Q9H6L2 316 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 GHRLQ9UBU3 117 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 PRELID3BQ9Y3B1 194 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 GOLT1BQ9Y3E0 138 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 HLA-DRB4X5D2U9 266 aa8.05□□□□□ -1.12
USP11-208ENST00000480104 A0A0A6YYD4 124 aa8.04□□□□□ -1.12
USP11-208ENST00000480104 FABP7O15540 132 aa8.04□□□□□ -1.12
USP11-208ENST00000480104 SERPINE2P07093 398 aa8.04□□□□□ -1.12
USP11-208ENST00000480104 WT1-ASQ06250 92 aa8.04□□□□□ -1.12
USP11-208ENST00000480104 DHRS2Q13268 280 aa8.04□□□□□ -1.12
USP11-208ENST00000480104 C1orf158Q8N1D5 194 aa8.04□□□□□ -1.12
USP11-208ENST00000480104 ZNF709Q8N972 641 aa8.04□□□□□ -1.12
USP11-208ENST00000480104 C7orf50Q9BRJ6 194 aaKnown RBP8.04□□□□□ -1.12
USP11-208ENST00000480104 CABLES2Q9BTV7 478 aa8.04□□□□□ -1.12
USP11-208ENST00000480104 QTRT1Q9BXR0 403 aaKnown RBP8.04□□□□□ -1.12
USP11-208ENST00000480104 TMEM59Q9BXS4 323 aa8.04□□□□□ -1.12
USP11-208ENST00000480104 KCNK15Q9H427 330 aa8.04□□□□□ -1.12
USP11-208ENST00000480104 F11RQ9Y624 299 aaKnown RBP8.04□□□□□ -1.12
USP11-208ENST00000480104 TRBV6-7A0A0A0MS04 114 aa8.03□□□□□ -1.12
USP11-208ENST00000480104 POLR2IP36954 125 aaKnown RBP8.03□□□□□ -1.12
USP11-208ENST00000480104 P2RY1P47900 373 aa8.03□□□□□ -1.12
USP11-208ENST00000480104 HNRNPA3P51991 378 aaKnown RBP8.03□□□□□ -1.12
USP11-208ENST00000480104 RCN1Q15293 331 aa8.03□□□□□ -1.12
USP11-208ENST00000480104 TIMM50Q3ZCQ8 353 aa8.03□□□□□ -1.12
USP11-208ENST00000480104 OR4C16Q8NGL9 310 aa8.03□□□□□ -1.12
USP11-208ENST00000480104 CANT1Q8WVQ1 401 aa8.03□□□□□ -1.12
USP11-208ENST00000480104 LGALS12Q96DT0 336 aa8.03□□□□□ -1.12
USP11-208ENST00000480104 GNPNAT1Q96EK6 184 aaPredicted RBP8.03□□□□□ -1.12
USP11-208ENST00000480104 Q96MT0 163 aa8.03□□□□□ -1.12
USP11-208ENST00000480104 ZFAND3Q9H8U3 227 aa8.03□□□□□ -1.12
USP11-208ENST00000480104 HRASLSQ9HDD0 168 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms