RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 IFI27L2Q9H2X8 130 aa2.98□□□□□ -1.93
CCDC171-207ENST00000478913 TUBA4BQ9H853 241 aa2.98□□□□□ -1.93
CCDC171-207ENST00000478913 TMEM138Q9NPI0 162 aa2.98□□□□□ -1.93
CCDC171-207ENST00000478913 TAS2R8Q9NYW2 309 aa2.98□□□□□ -1.93
CCDC171-207ENST00000478913 ZNRD1Q9P1U0 126 aa2.98□□□□□ -1.93
CCDC171-207ENST00000478913 MCTS1Q9ULC4 181 aaKnown RBP2.98□□□□□ -1.93
CCDC171-207ENST00000478913 APLNQ9ULZ1 77 aa2.98□□□□□ -1.93
CCDC171-207ENST00000478913 FXYD6-FXYD2A0A087WZ82 144 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 IGHV1-18A0A0C4DH31 117 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 IGHV1-69-2A0A0G2JMI3 117 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 SERTM2A0A1B0GWG4 89 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 PQLC2LA1A4F0 135 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 PRSS37A4D1T9 235 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 ZNF98A6NK75 572 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 RIIAD1A6NNX1 92 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 HMSDA8MTL9 139 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 DISC1C4P0D8 188 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 F5H5P2 479 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 F8W036 122 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 SMLR1H3BR10 107 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 SULT1C2O00338 296 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 GABRPO00591 440 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 XKRYO14609 159 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 GPR171O14626 319 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 NDUFA2O43678 99 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 GSTZ1O43708 216 aaPredicted RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 GATCO43716 136 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 OR1I1O60431 355 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 UPK3AO75631 287 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 RPN2P04844 631 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 SERPIND1P05546 499 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 FBP1P09467 338 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 SMIM6P0DI80 62 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 SULT1A3P0DMM9 295 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 SULT1A4P0DMN0 295 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 IGHV3-43DP0DP04 118 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 CELP19835 753 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 RAB3BP20337 219 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 TAGLN2P37802 199 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 CDKN2CP42773 168 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 OR1E2P47887 323 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 NPBWR2P48146 333 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 GDI2P50395 445 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 SUB1P53999 127 aaKnown RBP eCLIP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 TAS2R41P59536 307 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 ACTA2P62736 377 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 RPS25P62851 125 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 ACTG2P63267 376 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 C2orf80Q0P641 193 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 TRAM2Q15035 370 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 DEFB134Q4QY38 66 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 UBE2NLQ5JXB2 153 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 CTSL3PQ5NE16 218 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 HES5Q5TA89 166 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 ELP2Q6IA86 826 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 C10orf99Q6UWK7 81 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 ZNF836Q6ZNA1 936 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 OAFQ86UD1 273 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 TGIF2LXQ8IUE1 241 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 PCP2Q8IVA1 136 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 ZNF679Q8IYX0 411 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 C12orf45Q8N5I9 185 aaPredicted RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 EIF4E3Q8N5X7 224 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 INO80EQ8NBZ0 244 aaPredicted RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 MORN4Q8NDC4 146 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 BHLHE23Q8NDY6 225 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 PXT1Q8NFP0 134 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 OR1M1Q8NGA1 313 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 OR1L4Q8NGR5 311 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 OR2T4Q8NH00 348 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 RNASE11Q8TAA1 199 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 DOK4Q8TEW6 326 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 ABHD3Q8WU67 409 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 TNFAIP8L1Q8WVP5 186 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 OR5P2Q8WZ92 322 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 EXOSC8Q96B26 276 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 S100A16Q96FQ6 103 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 CNN2Q99439 309 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 TSNAXQ99598 290 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 C12orf57Q99622 126 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 NIPSNAP1Q9BPW8 284 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 FAIM2Q9BWQ8 316 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 MRPL37Q9BZE1 423 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 SLC19A3Q9BZV2 496 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 NKX6-2Q9C056 277 aaPredicted RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 ARL6Q9H0F7 186 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 FXYD6Q9H0Q3 95 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 SLC38A1Q9H2H9 487 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 MIXL1Q9H2W2 232 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 ANKRD19PQ9H560 264 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 MRPS30Q9NP92 439 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 ACER3Q9NUN7 267 aa2.97□□□□□ -1.93
CCDC171-207ENST00000478913 LSM2Q9Y333 95 aaKnown RBP2.97□□□□□ -1.93
CCDC171-207ENST00000478913 IGKV1-8A0A0C4DH67 115 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 KIR2DS1A0A191URI9 304 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 A0A1W2PRD5 423 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 A0A1W2PRF3 423 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 A0A1W2PRM7 423 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 RAB19A4D1S5 217 aa2.96□□□□□ -1.94
CCDC171-207ENST00000478913 C1orf196B1AJZ1 125 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms