RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 MAT2BQ9NZL9 334 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 PRELID1Q9Y255 219 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 SNX24Q9Y343 169 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 SIP14410 1827 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 E9PCH4 1651 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 COL4A5P29400 1685 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 ABCC12Q96J65 1359 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 MUC4Q99102 2169 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 FANCMQ8IYD8 2048 aa-0.09□□□□□ -2.42
HPS3-205ENST00000478525 TPRP12270 2363 aaKnown RBP-0.1□□□□□ -2.42
HPS3-205ENST00000478525 ZDBF2Q9HCK1 2354 aa-0.1□□□□□ -2.42
HPS3-205ENST00000478525 FABP5P3A8MUU1 101 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 LEPROTO15243 131 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 SULT1B1O43704 296 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 UBL3O95164 117 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 SPINK1P00995 79 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 IGHV3-7P01780 117 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 TPM2P07951 284 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 LIMS3P0CW19 117 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 LIMS4P0CW20 117 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 MIPP30301 263 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 S100A7P31151 101 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 EIF2B2P49770 351 aaKnown RBP-0.1□□□□□ -2.43
HPS3-205ENST00000478525 ZNF137PP52743 207 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 DYNLL1P63167 89 aaKnown RBP-0.1□□□□□ -2.43
HPS3-205ENST00000478525 QRFPP83859 136 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 HPCAP84074 193 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 FABP9Q0Z7S8 132 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 RAB31Q13636 194 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 OR10J3Q5JRS4 329 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 FAM78BQ5VT40 261 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 FAM45BPQ6NSW5 357 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 SBSNQ6UWP8 590 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 LINC00322Q6ZN03 302 aaPredicted RBP-0.1□□□□□ -2.43
HPS3-205ENST00000478525 SSX8Q7RTT4 187 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 C1orf174Q8IYL3 243 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 TMEM156Q8N614 296 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 OR4E2Q8NGC2 313 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 OR10D3Q8NH80 312 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 DYNC2LI1Q8TCX1 351 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 RASSF5Q8WWW0 418 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 PPCDCQ96CD2 204 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 RBP7Q96R05 134 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 GINS4Q9BRT9 223 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 SLC50A1Q9BRV3 221 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 OR51I2Q9H344 312 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 TNFSF18Q9UNG2 199 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 HS3ST2Q9Y278 367 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 HDGFL3Q9Y3E1 203 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 RBM7Q9Y580 266 aaKnown RBP-0.1□□□□□ -2.43
HPS3-205ENST00000478525 TIMM22Q9Y584 194 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 OTOGQ6ZRI0 2925 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 A0A1W2PP64 1363 aa-0.1□□□□□ -2.43
HPS3-205ENST00000478525 TTC21AQ8NDW8 1320 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 ZFYVE26Q68DK2 2539 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 MACF1Q9UPN3 7388 aaKnown RBP-0.11□□□□□ -2.43
HPS3-205ENST00000478525 ASXL3Q9C0F0 2248 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 TRBV6-8A0A0A6YYG3 113 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 C2orf70A6NJV1 201 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 ZNF736B4DX44 427 aaPredicted RBP-0.11□□□□□ -2.43
HPS3-205ENST00000478525 INMT-MINDY4F8WBC2 141 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 SULT1C2O00338 296 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 CCRL2O00421 344 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 COX7A2LO14548 114 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 CST4P01036 141 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 TFPTP0C1Z6 253 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 CCDC172P0C7W6 258 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 HIST1H1CP16403 213 aaKnown RBP-0.11□□□□□ -2.43
HPS3-205ENST00000478525 ZNF25P17030 456 aaPredicted RBP-0.11□□□□□ -2.43
HPS3-205ENST00000478525 RPS4Y1P22090 263 aaKnown RBP-0.11□□□□□ -2.43
HPS3-205ENST00000478525 ADORA1P30542 326 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 NUP62P37198 522 aaPredicted RBP-0.11□□□□□ -2.43
HPS3-205ENST00000478525 EFNA4P52798 201 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 FOXA3P55318 350 aaPredicted RBP-0.11□□□□□ -2.43
HPS3-205ENST00000478525 RPS24P62847 133 aaKnown RBP-0.11□□□□□ -2.43
HPS3-205ENST00000478525 HLA-DRB3P79483 266 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 C18orf21Q32NC0 220 aaPredicted RBP-0.11□□□□□ -2.43
HPS3-205ENST00000478525 DNAL1Q4LDG9 190 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 SPANXN3Q5MJ09 141 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 C6orf183Q5T699 404 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.11□□□□□ -2.43
HPS3-205ENST00000478525 RPL22L1Q6P5R6 122 aaKnown RBP-0.11□□□□□ -2.43
HPS3-205ENST00000478525 C10orf99Q6UWK7 81 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 LCN15Q6UWW0 184 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 C2orf82Q6UX34 121 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 LCA10Q71F78 164 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 SLC51BQ86UW2 128 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 GPHB5Q86YW7 130 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 TMEM251Q8N6I4 163 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 OR4A15Q8NGL6 344 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 AGR3Q8TD06 166 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 MSANTD3Q96H12 275 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 TMEM56Q96MV1 263 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 SCGB3A1Q96QR1 104 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 TMEM109Q9BVC6 243 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 TTTY13Q9BZ97 58 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 ULBP3Q9BZM4 244 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 CDC42SE1Q9NRR8 79 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 CHMP5Q9NZZ3 219 aa-0.11□□□□□ -2.43
HPS3-205ENST00000478525 HSPB8Q9UJY1 196 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms