RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 FCGR3BO75015 233 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 CD5P06127 495 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 CTSGP08311 255 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 LIMS3P0CW19 117 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 LIMS4P0CW20 117 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 CELP19835 753 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 FUSP35637 526 aaKnown RBP eCLIP5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 KRTAP10-1P60331 282 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 OXA1LQ15070 435 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 Q499Y3 187 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 TCF24Q7RTU0 167 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 C15orf53Q8NAA6 179 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 VSTM2AQ8TAG5 236 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 DGCR14Q96DF8 476 aaKnown RBP5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 NEU1Q99519 415 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 ATG101Q9BSB4 218 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 DCUN1D5Q9BTE7 237 aa5.13□□□□□ -1.59
SPTLC1-205ENST00000477888 TMEM189A5PLL7 270 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 SNTNA6NMZ2 147 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 DNASE2O00115 360 aaPredicted RBP5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 NUPL2O15504 423 aaKnown RBP5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 DCTN3O75935 186 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 HTN3P15516 51 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 GABRB1P18505 474 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 EMP1P54849 157 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 UCP3P55916 312 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 BRWD1-AS2P59051 145 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 OR2B8PP59922 312 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 RPL30P62888 115 aaKnown RBP5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 RPL8P62917 257 aaKnown RBP5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 QRFPP83859 136 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 PLA2G7Q13093 441 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 UNC119Q13432 240 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 IGSF11Q5DX21 431 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 UBE2UQ5VVX9 321 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 ZNF705AQ6ZN79 300 aaPredicted RBP5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 SPATA24Q86W54 205 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 DUSP18Q8NEJ0 188 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 OR4A4PQ8NGN8 299 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 SCARB1Q8WTV0 552 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 SMIM19Q96E16 107 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 NIPSNAP3BQ9BS92 247 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 TMEM59Q9BXS4 323 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 VSIRQ9H7M9 311 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 AMBNQ9NP70 447 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 C12orf4Q9NQ89 552 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 C21orf62Q9NYP8 219 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 PTTG2Q9NZH5 202 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 LINC00588Q9Y4M8 146 aa5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 LRP1Q07954 4544 aaKnown RBP5.12□□□□□ -1.59
SPTLC1-205ENST00000477888 A0A087WWL8 130 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 SMIM9A6NGZ8 99 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 FOXI3A8MTJ6 420 aaPredicted RBP5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 ZNF705FA8MVS1 300 aaPredicted RBP5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 BET1O15155 118 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 SOCS1O15524 211 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 FABP7O15540 132 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 DIRAS3O95661 229 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 LALBAP00709 142 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 APOHP02749 345 aaPredicted RBP5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 UBBP0CG47 229 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 ZNF705DP0CH99 300 aaPredicted RBP5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 ZNF705BP0CI00 300 aaPredicted RBP5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 HLA-GP17693 338 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 TMEM50BP56557 158 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 DLK1P80370 383 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 ICAM4Q14773 271 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 ATP6AP1Q15904 470 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 YIF1BQ5BJH7 314 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 ACTL10Q5JWF8 245 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 FAM222AQ5U5X8 452 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 FAM89BQ8N5H3 189 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 NKAIN3Q8N8D7 197 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 OR52I1Q8NGK6 324 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 OR10J5Q8NHC4 309 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 ST8SIA2Q92186 375 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 GGHQ92820 318 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 GRAMD2BQ96HH9 432 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 SLC29A1Q99808 456 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 CABLES2Q9BTV7 478 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 Q9H8V8 135 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 MRPS18AQ9NVS2 196 aaKnown RBP5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 BABAM2Q9NXR7 383 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 HSF4Q9ULV5 492 aa5.11□□□□□ -1.59
SPTLC1-205ENST00000477888 IGHV3-21A0A0B4J1V1 117 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 TEX48A0A1B0GUV7 120 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 LOC102723971A0A1B0GUV8 181 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 TMEM14DPA8MWL7 114 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 K7EIM0 57 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 K7EQG2 157 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 YIF1AO95070 293 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 IGLV2-14P01704 120 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 GYPEP15421 78 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 CRHBPP24387 322 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 CALRP27797 417 aaKnown RBP5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 CCL18P55774 89 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 RELQ04864 619 aaPredicted RBP5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 OR2B11Q5JQS5 317 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 CCDC28AQ8IWP9 274 aa5.1□□□□□ -1.59
SPTLC1-205ENST00000477888 GDPD1Q8N9F7 314 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms