RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 RASL11BQ9BPW5 248 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 HSPB9Q9BQS6 159 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 PRR13Q9NZ81 148 aa7.41□□□□□ -1.22
SMARCB1-206ENST00000477836 IGHV4OR15-8A0A075B7B6 117 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 A0A087WW49 117 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 A0A0B4J2A0 478 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 HMX3A6NHT5 357 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 GOSR2O14653 212 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 PFDN1O60925 122 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 SERPINE2P07093 398 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 SULT1A3P0DMM9 295 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 SULT1A4P0DMN0 295 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 ZNF137PP52743 207 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 FCN2Q15485 313 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 ANKRD55Q3KP44 614 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 OR2B11Q5JQS5 317 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 LIN54Q6MZP7 749 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 LINC00322Q6ZN03 302 aaPredicted RBP7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 ZNF833PQ6ZTB9 187 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 GTSCR1Q86UQ5 136 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 ODF3L1Q8IXM7 274 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 LGI3Q8N145 548 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 ADTRPQ96IZ2 230 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 EAF1Q96JC9 268 aaPredicted RBP7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 ELOVL1Q9BW60 279 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 TMEM222Q9H0R3 208 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 MGAT4CQ9UBM8 478 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 SHPKQ9UHJ6 478 aa7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 KLK5Q9Y337 293 aaPredicted RBP7.4□□□□□ -1.22
SMARCB1-206ENST00000477836 TXNL1O43396 289 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 IGF1P05019 195 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 UCP1P25874 307 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 DUTP33316 252 aaKnown RBP7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 KIR2DS2P43631 304 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 RAB9AP51151 201 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 EIF4EBP1Q13541 118 aaPredicted RBP7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 TMEM187Q14656 261 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 SP6Q3SY56 376 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 TMEM268Q5VZI3 342 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 MOB3BQ86TA1 216 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 OR8H3Q8N146 312 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 TCTEX1D1Q8N7M0 179 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 DRAXINQ8NBI3 349 aaPredicted RBP7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 OR11H7Q8NGC8 314 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 CD300LFQ8TDQ1 290 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 CHAC2Q8WUX2 184 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 IL22RA2Q969J5 263 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 PLEKHA3Q9HB20 300 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 GAB2Q9UQC2 676 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 PRELID3BQ9Y3B1 194 aa7.39□□□□□ -1.23
SMARCB1-206ENST00000477836 IGHV3-72A0A0B4J1Y9 119 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 A0A1B0GVY2 172 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 DUXBA0A1W2PPF3 345 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 G3V318 75 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 CCSO14618 274 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 RBFOX2O43251 390 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 FCGR3BO75015 233 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 CCNKO75909 580 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 CNIH1O95406 144 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 APOA2P02652 100 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 PPIFP30405 207 aaKnown RBP7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 REG1BP48304 166 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 AKR1C2P52895 323 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 RPL30P62888 115 aaKnown RBP7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 EBI3Q14213 229 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 RTL8BQ17RB0 113 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 SPAG16Q8N0X2 631 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 SLC35G3Q8N808 338 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 LRTM2Q8N967 370 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 OR4S2Q8NH73 311 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 RNASE11Q8TAA1 199 aaKnown RBP7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 GLYATL2Q8WU03 294 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 RBPMSQ93062 196 aaKnown RBP7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 TMEM56Q96MV1 263 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 ZNF251Q9BRH9 671 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 PDCD10Q9BUL8 212 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 MRPL20Q9BYC9 149 aaKnown RBP7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 TPSG1Q9NRR2 321 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 FAM212BQ9NTI7 297 aaPredicted RBP7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 SIGLEC8Q9NYZ4 499 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 WSB1Q9Y6I7 421 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 TMEM56-RWDD3S4R434 201 aa7.38□□□□□ -1.23
SMARCB1-206ENST00000477836 DBX1A6NMT0 343 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 LINC00473A8K010 186 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 FAM25EA8MYX2 175 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 PROP1O75360 226 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 ADAP1O75689 374 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 ATG12O94817 140 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 CDS2O95674 445 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 IFNA21P01568 189 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 IGLV1-40P01703 118 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 HOXB5P09067 269 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 LGALS1P09382 135 aaKnown RBP7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 RPA2P15927 270 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 CXCL3P19876 107 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 PRR20EP86478 221 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 PRR20CP86479 221 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 PRR20DP86480 221 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 PRR20BP86481 221 aa7.37□□□□□ -1.23
SMARCB1-206ENST00000477836 PRR20AP86496 221 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms