RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 NXPH3O95157 252 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 IFNA21P01568 189 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 CHRNA7P36544 502 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 TMEM267Q0VDI3 215 aaPredicted RBP12.03□□□□□ -0.48
SEC13-215ENST00000477547 C19orf54Q5BKX5 351 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 ZNF429Q86V71 674 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 MINDY2Q8NBR6 621 aa12.03□□□□□ -0.48
SEC13-215ENST00000477547 TEX50A0A1B0GTY4 177 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 A0A1B0GU03 582 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 C7orf66A4D0T2 115 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 HMX3A6NHT5 357 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 E7EUB6 86 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 TRAPPC2P0DI81 140 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 TRAPPC2BP0DI82 140 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 CFHR3Q02985 330 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 PDLIM3Q53GG5 364 aaPredicted RBP12.02□□□□□ -0.49
SEC13-215ENST00000477547 SPINK9Q5DT21 86 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 ASPHD1Q5U4P2 390 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 C10orf99Q6UWK7 81 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 CENPVQ7Z7K6 275 aaPredicted RBP12.02□□□□□ -0.49
SEC13-215ENST00000477547 ZNF329Q86UD4 541 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 OR1S1Q8NH92 325 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.02□□□□□ -0.49
SEC13-215ENST00000477547 COA4Q9NYJ1 87 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 ALG5Q9Y673 324 aa12.02□□□□□ -0.49
SEC13-215ENST00000477547 IGLC7A0M8Q6 106 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 MPTX1A8MV57 137 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 SSNA1O43805 119 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 IFNA17P01571 189 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 SLC25A6P12236 298 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 AREGP15514 252 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 HOXA1P49639 335 aaPredicted RBP12.01□□□□□ -0.49
SEC13-215ENST00000477547 PRCDQ00LT1 54 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 AKIRIN2Q53H80 203 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 C3orf56Q8N813 242 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 OR4X2Q8NGF9 303 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 PLEKHA3Q9HB20 300 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 NDUFA4L2Q9NRX3 87 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 PKD1L1Q8TDX9 2849 aa12.01□□□□□ -0.49
SEC13-215ENST00000477547 FBXO24O75426 580 aa12□□□□□ -0.49
SEC13-215ENST00000477547 REG1AP05451 166 aa12□□□□□ -0.49
SEC13-215ENST00000477547 HSPE1P61604 102 aaKnown RBP12□□□□□ -0.49
SEC13-215ENST00000477547 AARDQ4LEZ3 155 aa12□□□□□ -0.49
SEC13-215ENST00000477547 MRPL41Q8IXM3 137 aaKnown RBP12□□□□□ -0.49
SEC13-215ENST00000477547 OR5AU1Q8NGC0 362 aa12□□□□□ -0.49
SEC13-215ENST00000477547 OR10W1Q8NGF6 305 aa12□□□□□ -0.49
SEC13-215ENST00000477547 FAM110DQ8TAY7 271 aaPredicted RBP12□□□□□ -0.49
SEC13-215ENST00000477547 WIPF2Q8TF74 440 aaPredicted RBP12□□□□□ -0.49
SEC13-215ENST00000477547 TMEM68Q96MH6 324 aa12□□□□□ -0.49
SEC13-215ENST00000477547 SRSF8Q9BRL6 282 aaKnown RBP12□□□□□ -0.49
SEC13-215ENST00000477547 FAM25EA8MYX2 175 aa11.99□□□□□ -0.49
SEC13-215ENST00000477547 GOSR2O14653 212 aa11.99□□□□□ -0.49
SEC13-215ENST00000477547 SOX15O60248 233 aa11.99□□□□□ -0.49
SEC13-215ENST00000477547 IGHG4P01861 327 aa11.99□□□□□ -0.49
SEC13-215ENST00000477547 PPIFP30405 207 aaKnown RBP11.99□□□□□ -0.49
SEC13-215ENST00000477547 SPCS3P61009 180 aa11.99□□□□□ -0.49
SEC13-215ENST00000477547 IAH1Q2TAA2 248 aaPredicted RBP11.99□□□□□ -0.49
SEC13-215ENST00000477547 HSD17B13Q7Z5P4 300 aaPredicted RBP11.99□□□□□ -0.49
SEC13-215ENST00000477547 COMMD1Q8N668 190 aa11.99□□□□□ -0.49
SEC13-215ENST00000477547 C11orf44Q8N8P7 122 aa11.99□□□□□ -0.49
SEC13-215ENST00000477547 OR5T1Q8NG75 326 aa11.99□□□□□ -0.49
SEC13-215ENST00000477547 OR5M8Q8NGP6 311 aa11.99□□□□□ -0.49
SEC13-215ENST00000477547 ENY2Q9NPA8 101 aa11.99□□□□□ -0.49
SEC13-215ENST00000477547 TRRAPQ9Y4A5 3859 aa11.99□□□□□ -0.49
SEC13-215ENST00000477547 C13orf42A0A1B0GVH6 325 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 C5orf51A6NDU8 294 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 NPIPB5A8MRT5 1133 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 OR13C7P0DN81 318 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 PF4V1P10720 104 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 WT1-ASQ06250 92 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 TNFRSF9Q07011 255 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 FOXE3Q13461 319 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 CXorf66Q5JRM2 361 aaPredicted RBP11.98□□□□□ -0.49
SEC13-215ENST00000477547 KHDC1LQ5JSQ8 128 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 TEX38Q6PEX7 206 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 C19orf35Q6ZS72 473 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 OR52E5Q8NH55 327 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 OR10C1Q96KK4 312 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 ZNF355PQ9NSJ1 428 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 HSPB7Q9UBY9 170 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 CACFD1Q9UGQ2 172 aa11.98□□□□□ -0.49
SEC13-215ENST00000477547 CEBPZOSA8MTT3 80 aa11.97□□□□□ -0.49
SEC13-215ENST00000477547 PITX3O75364 302 aa11.97□□□□□ -0.49
SEC13-215ENST00000477547 IGLV1-40P01703 118 aa11.97□□□□□ -0.49
SEC13-215ENST00000477547 ELANEP08246 267 aa11.97□□□□□ -0.49
SEC13-215ENST00000477547 CD28P10747 220 aa11.97□□□□□ -0.49
SEC13-215ENST00000477547 PSMB6P28072 239 aa11.97□□□□□ -0.49
SEC13-215ENST00000477547 KRTAP10-3P60369 221 aa11.97□□□□□ -0.49
SEC13-215ENST00000477547 DEFA6Q01524 100 aa11.97□□□□□ -0.49
SEC13-215ENST00000477547 C2orf68Q2NKX9 166 aa11.97□□□□□ -0.49
SEC13-215ENST00000477547 GSG1LQ6UXU4 331 aa11.97□□□□□ -0.49
SEC13-215ENST00000477547 LCNL1Q6ZST4 164 aa11.97□□□□□ -0.49
SEC13-215ENST00000477547 TTC9CQ8N5M4 171 aa11.97□□□□□ -0.49
SEC13-215ENST00000477547 ZBTB8BQ8NAP8 495 aaPredicted RBP11.97□□□□□ -0.49
SEC13-215ENST00000477547 FAM90A26D6RGX4 464 aa11.96□□□□□ -0.49
SEC13-215ENST00000477547 H3BUA1 57 aa11.96□□□□□ -0.49
SEC13-215ENST00000477547 SCGB1D2O95969 90 aa11.96□□□□□ -0.49
SEC13-215ENST00000477547 CTRB1P17538 263 aa11.96□□□□□ -0.49
SEC13-215ENST00000477547 PSMB8P28062 276 aa11.96□□□□□ -0.49
SEC13-215ENST00000477547 TPPP2P59282 170 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms