RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	OPN1MW2	P0DN77	364 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	OPN1MW3	P0DN78	364 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	IGKV1-13	P0DP09	117 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	AKR1C4	P17516	323 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	MT3	P25713	68 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	PAX6	P26367	422 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	MAS1L	P35410	378 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	LPAR6	P43657	344 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	F2RL1	P55085	397 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	UBE2K	P61086	200 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	RND3	P61587	244 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	DIAPH2-AS1	Q14236	149 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	ZNF79	Q15937	498 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	TNXA	Q16473	311 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	C5orf64	Q2M2E5	130 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	TMEM128	Q5BJH2	165 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	PIK3CD-AS1	Q5SR53	167 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	ZNF660	Q6AZW8	331 aa	Predicted RBP	3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	THOC7	Q6I9Y2	204 aa	Known RBP	3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	FAM53A	Q6NSI3	398 aa	Predicted RBP	3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	ACSM6	Q6P461	480 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	PLET1	Q6UQ28	207 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	SSX9	Q7RTT3	188 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	H2BFWT	Q7Z2G1	175 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	SLC25A42	Q86VD7	318 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	PPP1R27	Q86WC6	154 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	FAM219A	Q8IW50	185 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	ODF3L1	Q8IXM7	274 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	LGI3	Q8N145	548 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	C5orf56	Q8N8D9	126 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	ZNF383	Q8NA42	475 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	NPB	Q8NG41	125 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	OR13C8	Q8NGS7	320 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	OR4A16	Q8NH70	328 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	COQ8A	Q8NI60	647 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	TMEM56	Q96MV1	263 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	OR2A7	Q96R45	310 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	SPIN2A	Q99865	258 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	SPIN2B	Q9BPZ2	258 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	C19orf24	Q9BVV8	132 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	PARP12	Q9H0J9	701 aa	Known RBP	3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	FXYD6	Q9H0Q3	95 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	FBXL15	Q9H469	300 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	C16orf95	Q9H693	158 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	PLEKHA2	Q9HB19	425 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	GPN1	Q9HCN4	374 aa	Predicted RBP	3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	ESM1	Q9NQ30	184 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	PARP11	Q9NR21	331 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	ZNF355P	Q9NSJ1	428 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	TLN2	Q9Y4G6	2542 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	ABCA2	Q9BZC7	2435 aa		3.56	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	SON	P18583	2426 aa	Known RBP	3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	TMEM89	A2RUT3	159 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	PSMB11	A5LHX3	300 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289		H0Y980	276 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	SCGB2A1	O75556	95 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	UPK1B	O75841	260 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	NDUFB6	O95139	128 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	NDUFA3	O95167	84 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	CA2	P00918	260 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	KRAS	P01116	189 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	HLA-DRB1	P01911	266 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	IGKV1-16	P04430	117 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	DEFA4	P12838	97 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	UBE2M	P61081	183 aa	Known RBP	3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	RPL8	P62917	257 aa	Known RBP	3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	FXYD3	Q14802	87 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	PSG5	Q15238	335 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	BAK1	Q16611	211 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	KRTAP21-3	Q3LHN1	58 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	CXorf66	Q5JRM2	361 aa	Predicted RBP	3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	LDLRAD2	Q5SZI1	272 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	UTF1	Q5T230	341 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	FAAP20	Q6NZ36	180 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	TEX38	Q6PEX7	206 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	UNQ5815/PRO19632	Q6UWF5	114 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	ZNF562	Q6V9R5	426 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289		Q6ZSV7	163 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	LHFPL1	Q86WI0	220 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289		Q8N9W7	124 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	OR4D10	Q8NGI6	311 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	GRPEL2	Q8TAA5	225 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	PIFO	Q8TCI5	191 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	GLMP	Q8WWB7	406 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	ARPC1A	Q92747	370 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	RBPMS	Q93062	196 aa	Known RBP	3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	IL22RA2	Q969J5	263 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	TRIM63	Q969Q1	353 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	CYYR1	Q96J86	154 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	ELOVL1	Q9BW60	279 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	HINT2	Q9BX68	163 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	OR51J1	Q9H342	316 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	NAA60	Q9H7X0	242 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	BET1L	Q9NYM9	111 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	THYN1	Q9P016	225 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	PRND	Q9UKY0	176 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	GPR132	Q9UNW8	380 aa		3.55	□□□□□ -1.84
NSMCE4A-208	ENST00000477289	MMP24	Q9Y5R2	645 aa		3.55	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms