RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PMCHL2Q9BQD1 86 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 NPFFR1Q9GZQ6 430 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 TMEM95Q3KNT9 176 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 FAM216BQ8N7L0 139 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 H3BRM9 83 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 SMIM10L1P0DMW3 83 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 CNTFRP26992 372 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 SMIM10Q96HG1 83 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 SLC25A38Q96DW6 304 aa15.73■□□□□ 0.11
VARS2-209ENST00000477288 TMEM250H0YL14 139 aa15.72■□□□□ 0.11
VARS2-209ENST00000477288 IGHMP01871 453 aa15.72■□□□□ 0.11
VARS2-209ENST00000477288 EFEMP2O95967 443 aa15.72■□□□□ 0.11
VARS2-209ENST00000477288 HOXA5P20719 270 aa15.72■□□□□ 0.11
VARS2-209ENST00000477288 RNASEH2CQ8TDP1 164 aaKnown RBP15.72■□□□□ 0.11
VARS2-209ENST00000477288 PEX7O00628 323 aa15.72■□□□□ 0.11
VARS2-209ENST00000477288 NDUFA3O95167 84 aa15.72■□□□□ 0.11
VARS2-209ENST00000477288 SAA1P0DJI8 122 aaPredicted RBP15.72■□□□□ 0.11
VARS2-209ENST00000477288 C1QTNF12Q5T7M4 302 aa15.72■□□□□ 0.11
VARS2-209ENST00000477288 APCDD1LQ8NCL9 501 aa15.72■□□□□ 0.11
VARS2-209ENST00000477288 OR5AN1Q8NGI8 311 aa15.72■□□□□ 0.11
VARS2-209ENST00000477288 ARPC1AQ92747 370 aa15.72■□□□□ 0.11
VARS2-209ENST00000477288 APOHP02749 345 aaPredicted RBP15.71■□□□□ 0.11
VARS2-209ENST00000477288 TRBV9A0A0B4J1U6 114 aa15.71■□□□□ 0.11
VARS2-209ENST00000477288 RBMY1BA6NDE4 496 aaKnown RBP15.71■□□□□ 0.11
VARS2-209ENST00000477288 RBMY1EA6NEQ0 496 aaKnown RBP15.71■□□□□ 0.11
VARS2-209ENST00000477288 RBMY1DP0C7P1 496 aaKnown RBP15.71■□□□□ 0.11
VARS2-209ENST00000477288 RBMY1A1P0DJD3 496 aaKnown RBP15.71■□□□□ 0.11
VARS2-209ENST00000477288 RBMY1CP0DJD4 496 aa15.71■□□□□ 0.11
VARS2-209ENST00000477288 WNT10AQ9GZT5 417 aa15.71■□□□□ 0.11
VARS2-209ENST00000477288 CGAP01215 116 aa15.71■□□□□ 0.11
VARS2-209ENST00000477288 GLMPQ8WWB7 406 aa15.71■□□□□ 0.11
VARS2-209ENST00000477288 PRB3Q04118 309 aaPredicted RBP15.71■□□□□ 0.1
VARS2-209ENST00000477288 C2orf68Q2NKX9 166 aa15.71■□□□□ 0.1
VARS2-209ENST00000477288 FAM71F2Q6NXP2 309 aa15.71■□□□□ 0.1
VARS2-209ENST00000477288 DDTP30046 118 aa15.7■□□□□ 0.1
VARS2-209ENST00000477288 NBEAP1P0C6P0 100 aa15.7■□□□□ 0.1
VARS2-209ENST00000477288 ASPHD2Q6ICH7 369 aa15.7■□□□□ 0.1
VARS2-209ENST00000477288 C1orf162Q8NEQ5 155 aaPredicted RBP15.7■□□□□ 0.1
VARS2-209ENST00000477288 IGFBP2P18065 325 aa15.7■□□□□ 0.1
VARS2-209ENST00000477288 VDAC2P45880 294 aaPredicted RBP15.7■□□□□ 0.1
VARS2-209ENST00000477288 ST6GALNAC6Q969X2 333 aa15.7■□□□□ 0.1
VARS2-209ENST00000477288 PEMTQ9UBM1 199 aa15.7■□□□□ 0.1
VARS2-209ENST00000477288 CHCHD2Q9Y6H1 151 aaPredicted RBP15.7■□□□□ 0.1
VARS2-209ENST00000477288 IFI27L2Q9H2X8 130 aa15.7■□□□□ 0.1
VARS2-209ENST00000477288 RAMP1O60894 148 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 COLCA1Q6ZS62 124 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 GATAD1Q8WUU5 269 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 APOMO95445 188 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 SDF2L1Q9HCN8 221 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 WNK3Q9BYP7 1800 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 IGHV2OR16-5A0A0B4J2B6 119 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 A0A0G2JMM0 328 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 A0A1W2PPB8 328 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 A0A1W2PRS3 328 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 KIR3DP1A8MWS1 328 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 SLC17A3O00476 420 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 RTN4RL2Q86UN3 420 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 J3QW42 95 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 IFITM3Q01628 133 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 HIST1H2BAQ96A08 127 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 CTHRC1Q96CG8 243 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 C21orf62Q9NYP8 219 aa15.69■□□□□ 0.1
VARS2-209ENST00000477288 DANCRP0C864 163 aa15.68■□□□□ 0.1
VARS2-209ENST00000477288 ZNFX1Q9P2E3 1918 aaKnown RBP15.68■□□□□ 0.1
VARS2-209ENST00000477288 TFF3Q07654 80 aa15.68■□□□□ 0.1
VARS2-209ENST00000477288 AICDAQ9GZX7 198 aa15.68■□□□□ 0.1
VARS2-209ENST00000477288 STHQ8IWL8 128 aa15.68■□□□□ 0.1
VARS2-209ENST00000477288 ZDBF2Q9HCK1 2354 aa15.68■□□□□ 0.1
VARS2-209ENST00000477288 TRAV12-3A0A0B4J271 114 aa15.68■□□□□ 0.1
VARS2-209ENST00000477288 PIN1P1O15428 100 aa15.68■□□□□ 0.1
VARS2-209ENST00000477288 TDRD15B5MCY1 1934 aaKnown RBP15.68■□□□□ 0.1
VARS2-209ENST00000477288 GCM2O75603 506 aaPredicted RBP15.68■□□□□ 0.1
VARS2-209ENST00000477288 CA7P43166 264 aa15.68■□□□□ 0.1
VARS2-209ENST00000477288 IGLV3-21P80748 117 aaPredicted RBP15.68■□□□□ 0.1
VARS2-209ENST00000477288 LEMD1Q68G75 181 aa15.68■□□□□ 0.1
VARS2-209ENST00000477288 TTC9CQ8N5M4 171 aa15.68■□□□□ 0.1
VARS2-209ENST00000477288 NPCDR1Q9BY65 106 aa15.68■□□□□ 0.1
VARS2-209ENST00000477288 TM4SF5O14894 197 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 IFI6P09912 130 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 ZNF883P0CG24 379 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 SPAG8Q99932 426 aaPredicted RBP15.67■□□□□ 0.1
VARS2-209ENST00000477288 DPRXA6NFQ7 191 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 C12orf77C9JDV5 145 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 CTAG1AP78358 180 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 FAM209BQ5JX69 171 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 C14orf144Q96I85 54 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 GP6Q9HCN6 339 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 TYMSP04818 313 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 IGHV1-2P23083 117 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 H2BFSP57053 126 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 EGR4Q05215 589 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 ASXL3Q9C0F0 2248 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 A0A1B0GWB2 263 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 LOC390937A0A1W2PQ73 354 aa15.67■□□□□ 0.1
VARS2-209ENST00000477288 OSR1Q8TAX0 266 aaPredicted RBP15.67■□□□□ 0.1
VARS2-209ENST00000477288 MRPL20Q9BYC9 149 aaKnown RBP15.67■□□□□ 0.1
VARS2-209ENST00000477288 SCN10AQ9Y5Y9 1956 aa15.66■□□□□ 0.1
VARS2-209ENST00000477288 FAM169BQ8N8A8 192 aa15.66■□□□□ 0.1
VARS2-209ENST00000477288 STAG3L3P0CL85 134 aa15.66■□□□□ 0.1
VARS2-209ENST00000477288 IMMP2LQ96T52 175 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms