RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 PAIP2BQ9ULR5 123 aaKnown RBP4.65□□□□□ -1.67
CDKN1B-204ENST00000477087 AMMECR1Q9Y4X0 333 aaPredicted RBP4.65□□□□□ -1.67
CDKN1B-204ENST00000477087 MINOS1-NBL1R4GNA1 71 aa4.65□□□□□ -1.67
CDKN1B-204ENST00000477087 U3KQ87 197 aa4.65□□□□□ -1.67
CDKN1B-204ENST00000477087 DSCAMO60469 2012 aa4.65□□□□□ -1.67
CDKN1B-204ENST00000477087 USP9XQ93008 2570 aaPredicted RBP4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 IGHV2-26A0A0B4J1V2 119 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 IGHV3-43A0A0B4J1X8 118 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 LEUTXA8MZ59 168 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 SMLR1H3BR10 107 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 BUB1B-PAK6H3BSN5 160 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 M0R1X1 148 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 CCSO14618 274 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 TIMM23O14925 209 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 SYNGR2O43760 224 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 SOX15O60248 233 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 RAMP3O60896 148 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 SAA2P0DJI9 122 aaPredicted RBP4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 IGHV3-43DP0DP04 118 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 OMGP23515 440 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 RPL12P30050 165 aaKnown RBP4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 CDKN1AP38936 164 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 CEACAM3P40198 252 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 RAB13P51153 203 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 NKX2-5P52952 324 aaPredicted RBP4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 AP2S1P53680 142 aaPredicted RBP4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 PAX9P55771 341 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 BPIFB3P59826 476 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 SPCS3P61009 180 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 EBI3Q14213 229 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 ATP6V1FQ16864 119 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 RTL8BQ17RB0 113 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 HLA-DRB5Q30154 266 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 EIF5AL1Q6IS14 154 aaKnown RBP4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 H2BFWTQ7Z2G1 175 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 OR8H3Q8N146 312 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 LYG1Q8N1E2 194 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 Q8N7P7 452 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 UBAC2Q8NBM4 344 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 ZNF680Q8NEM1 530 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 OR4C13Q8NGP0 309 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 VSTM2AQ8TAG5 236 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 TCTEX1D2Q8WW35 142 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 H1FXQ92522 213 aaKnown RBP4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 CCL19Q99731 98 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 NABP2Q9BQ15 211 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 GGACTQ9BVM4 153 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 CYTL1Q9NRR1 136 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 LYRM2Q9NU23 88 aaPredicted RBP4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 MED9Q9NWA0 146 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 DPM3Q9P2X0 92 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 MBD2Q9UBB5 411 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 KCNS2Q9ULS6 477 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 TBL2Q9Y4P3 447 aaKnown RBP4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 FAM208BQ5VWN6 2430 aa4.64□□□□□ -1.67
CDKN1B-204ENST00000477087 RELNP78509 3460 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 FXYD6-FXYD2A0A087WZ82 144 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 IGHV2-70DA0A0C4DH43 119 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 A0A0G2JRQ6 117 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 KANTRA0A1W2PQU2 76 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 PRSS47A8MTI9 375 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 ODF3BA8MYP8 253 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 H0YJW9 148 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 SLC31A2O15432 143 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 TNFSF12O43508 249 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 BCL2L11O43521 198 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 CHST1O43916 411 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 FCGR3BO75015 233 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 NDUFS7O75251 213 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 TSPAN9O75954 239 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 KRASP01116 189 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 OR8U8P0C7N1 319 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 NFYBP25208 207 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 HTR1DP28221 377 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 CD1BP29016 333 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 UBE2E1P51965 193 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 AKR1C2P52895 323 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 ATP5J2P56134 94 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 UBE2KP61086 200 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 HSPE1P61604 102 aaKnown RBP4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 RPL23AP62750 156 aaKnown RBP4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 RPP30P78346 268 aaKnown RBP4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 TNFRSF9Q07011 255 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 LOXL1Q08397 574 aaPredicted RBP4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 CXorf66Q5JRM2 361 aaPredicted RBP4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 CLLU1Q5K131 121 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 AVPI1Q5T686 147 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 PRAMEF5Q5TYX0 476 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 FAM53AQ6NSI3 398 aaPredicted RBP4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 CLEC2AQ6UVW9 174 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 TMEM14EPQ6UXP3 125 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 HSD17B13Q7Z5P4 300 aaPredicted RBP4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 CENPVQ7Z7K6 275 aaPredicted RBP4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 TGIF2LXQ8IUE1 241 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 BAP18Q8IXM2 172 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 TMEM252Q8N6L7 170 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 OR4P4Q8NGL7 312 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 OR10X1Q8NGY0 326 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 OR5B3Q8NH48 314 aa4.63□□□□□ -1.67
CDKN1B-204ENST00000477087 CLDND2Q8NHS1 167 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms