RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 TRAPPC2BP0DI82 140 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 RND3P61587 244 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 MEF2DQ14814 521 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 SCGB2B2Q4G0G5 96 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 HSD17B13Q7Z5P4 300 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-205ENST00000476387 CADM3Q8N126 398 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 MCFD2Q8NI22 146 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 EEF1AKMT3Q96AZ1 226 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 HINT2Q9BX68 163 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 SLIRPQ9GZT3 109 aaKnown RBP12.37□□□□□ -0.43
COL1A1-205ENST00000476387 PRNDQ9UKY0 176 aa12.37□□□□□ -0.43
COL1A1-205ENST00000476387 BMPR1BO00238 502 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 CTDSPLO15194 276 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 PI3P19957 117 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 PIGPP57054 158 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 SBSPONQ8IVN8 264 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 CCDC71LQ8N9Z2 235 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 OR4D10Q8NGI6 311 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 TERB2Q8NHR7 220 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 ZFAND1Q8TCF1 268 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 FANCD2OSQ96PS1 177 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 FKBP11Q9NYL4 201 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 THYN1Q9P016 225 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 PEMTQ9UBM1 199 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 NSG2Q9Y328 171 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 OR51B2Q9Y5P1 312 aa12.36□□□□□ -0.43
COL1A1-205ENST00000476387 IGLV11-55A0A075B6I3 123 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 TEX50A0A1B0GTY4 177 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 DISC1C4P0D8 188 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 H0Y980 276 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 NDUFB8O95169 186 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 IGLV1-51P01701 117 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 FRMD6-AS1P0C7T7 363 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 PTBP1P26599 531 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL1A1-205ENST00000476387 MECP2P51608 486 aaKnown RBP12.35□□□□□ -0.43
COL1A1-205ENST00000476387 H2BFWTQ7Z2G1 175 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 HAPLN4Q86UW8 402 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 GDPD1Q8N9F7 314 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 OR10W1Q8NGF6 305 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 LSM10Q969L4 123 aaKnown RBP12.35□□□□□ -0.43
COL1A1-205ENST00000476387 MRGPRFQ96AM1 343 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 CXorf58Q96LI9 332 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 COPZ2Q9P299 210 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 RSL24D1Q9UHA3 163 aaKnown RBP12.35□□□□□ -0.43
COL1A1-205ENST00000476387 CEPT1Q9Y6K0 416 aa12.35□□□□□ -0.43
COL1A1-205ENST00000476387 C15orf61A6NNL5 157 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 PPP5D1E7EU14 171 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 GGCTO75223 188 aaKnown RBP12.34□□□□□ -0.43
COL1A1-205ENST00000476387 IGHV3-23P01764 117 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 AKAIN1P0CW23 69 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 OR13C7P0DN81 318 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 FAAP20Q6NZ36 180 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 OR13C8Q8NGS7 320 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 OR5B3Q8NH48 314 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 OR4A16Q8NH70 328 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 SEC22AQ96IW7 307 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 TMEM56Q96MV1 263 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 RCHY1Q96PM5 261 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 C14orf166Q9Y224 244 aaKnown RBP12.34□□□□□ -0.43
COL1A1-205ENST00000476387 S4R3C0 116 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 RYR3Q15413 4870 aa12.34□□□□□ -0.43
COL1A1-205ENST00000476387 TRBV7-1A0A0A6YYK4 115 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 TNFSF8P32971 234 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 ARL3P36405 182 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 AKR1C2P52895 323 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 WT1-ASQ06250 92 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 KLK9Q2XQG4 91 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 CLEC19AQ6UXS0 136 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 OR4C16Q8NGL9 310 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 MARCH1Q8TCQ1 289 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 CCDC140Q96MF4 163 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 NDUFA4L2Q9NRX3 87 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 TMEM14BQ9NUH8 114 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 KLK9Q9UKQ9 250 aa12.33□□□□□ -0.44
COL1A1-205ENST00000476387 C3orf85A0A1B0GTC6 90 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 FABP12A6NFH5 140 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 MFSD2BA6NFX1 497 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 A8MZ25 164 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 GSTZ1O43708 216 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-205ENST00000476387 ATG12O94817 140 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 IGKV1-39P01597 117 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 IGKV1D-39P04432 117 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 CTSDP07339 412 aaPredicted RBP12.32□□□□□ -0.44
COL1A1-205ENST00000476387 TRIM16LQ309B1 348 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 IL34Q6ZMJ4 242 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 TP53RKQ96S44 253 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 PRRT1Q99946 306 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 NXF2Q9GZY0 626 aaKnown RBP12.32□□□□□ -0.44
COL1A1-205ENST00000476387 ZMAT4Q9H898 229 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 DNAH7Q8WXX0 4024 aa12.32□□□□□ -0.44
COL1A1-205ENST00000476387 B3GALNT1O75752 331 aa12.31□□□□□ -0.44
COL1A1-205ENST00000476387 HLA-AP01891 365 aaKnown RBP12.31□□□□□ -0.44
COL1A1-205ENST00000476387 CSN3P07498 182 aa12.31□□□□□ -0.44
COL1A1-205ENST00000476387 IGHV4-30-4P0DP06 118 aa12.31□□□□□ -0.44
COL1A1-205ENST00000476387 S100A5P33763 92 aa12.31□□□□□ -0.44
COL1A1-205ENST00000476387 SURF2Q15527 256 aaPredicted RBP12.31□□□□□ -0.44
COL1A1-205ENST00000476387 LCN12Q6JVE5 192 aa12.31□□□□□ -0.44
COL1A1-205ENST00000476387 SLC25A24Q6NUK1 477 aa12.31□□□□□ -0.44
COL1A1-205ENST00000476387 Q8N1Y9 231 aa12.31□□□□□ -0.44
COL1A1-205ENST00000476387 RNASE11Q8TAA1 199 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms