RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 MINDY2Q8NBR6 621 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 QTRT1Q9BXR0 403 aaKnown RBP11.24□□□□□ -0.61
CCNL1-217ENST00000476367 NDUFA4L2Q9NRX3 87 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 FOXA2Q9Y261 457 aaPredicted RBP11.24□□□□□ -0.61
CCNL1-217ENST00000476367 TSSC4Q9Y5U2 329 aaPredicted RBP11.24□□□□□ -0.61
CCNL1-217ENST00000476367 C7orf66A4D0T2 115 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 HMX3A6NHT5 357 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 MSGN1A6NI15 193 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 FOXE3Q13461 319 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 GGNBP1Q5YKI7 109 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 C11orf87Q6NUJ2 197 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 C19orf35Q6ZS72 473 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 ZNF429Q86V71 674 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 OR10W1Q8NGF6 305 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 CACNG5Q9UF02 275 aa11.24□□□□□ -0.61
CCNL1-217ENST00000476367 IGLC7A0M8Q6 106 aa11.23□□□□□ -0.61
CCNL1-217ENST00000476367 NUDT19A8MXV4 375 aa11.23□□□□□ -0.61
CCNL1-217ENST00000476367 ST8SIA3O43173 380 aa11.23□□□□□ -0.61
CCNL1-217ENST00000476367 RBMXL2O75526 392 aaKnown RBP11.23□□□□□ -0.61
CCNL1-217ENST00000476367 ELANEP08246 267 aa11.23□□□□□ -0.61
CCNL1-217ENST00000476367 HOXB5P09067 269 aa11.23□□□□□ -0.61
CCNL1-217ENST00000476367 MAS1LP35410 378 aa11.23□□□□□ -0.61
CCNL1-217ENST00000476367 RPL23AP62750 156 aaKnown RBP11.23□□□□□ -0.61
CCNL1-217ENST00000476367 SRPXP78539 464 aa11.23□□□□□ -0.61
CCNL1-217ENST00000476367 TATDN3Q17R31 274 aa11.23□□□□□ -0.61
CCNL1-217ENST00000476367 AKIRIN2Q53H80 203 aa11.23□□□□□ -0.61
CCNL1-217ENST00000476367 C18orf65Q6ZTR6 163 aa11.23□□□□□ -0.61
CCNL1-217ENST00000476367 FAM219AQ8IW50 185 aa11.23□□□□□ -0.61
CCNL1-217ENST00000476367 NBEAL1Q6ZS30 2694 aa11.23□□□□□ -0.61
CCNL1-217ENST00000476367 DUXBA0A1W2PPF3 345 aa11.22□□□□□ -0.61
CCNL1-217ENST00000476367 IGLV1-40P01703 118 aa11.22□□□□□ -0.61
CCNL1-217ENST00000476367 AREGP15514 252 aa11.22□□□□□ -0.61
CCNL1-217ENST00000476367 PSMB8P28062 276 aa11.22□□□□□ -0.61
CCNL1-217ENST00000476367 RPL27AP46776 148 aaKnown RBP11.22□□□□□ -0.61
CCNL1-217ENST00000476367 WT1-ASQ06250 92 aa11.22□□□□□ -0.61
CCNL1-217ENST00000476367 TMEM65Q6PI78 240 aa11.22□□□□□ -0.61
CCNL1-217ENST00000476367 KLHL30-AS1Q8NEE0 82 aa11.22□□□□□ -0.61
CCNL1-217ENST00000476367 RRNAD1Q96FB5 475 aaKnown RBP11.22□□□□□ -0.61
CCNL1-217ENST00000476367 OR10C1Q96KK4 312 aa11.22□□□□□ -0.61
CCNL1-217ENST00000476367 FYTTD1Q96QD9 318 aaKnown RBP11.22□□□□□ -0.61
CCNL1-217ENST00000476367 KLK15Q9H2R5 256 aa11.22□□□□□ -0.61
CCNL1-217ENST00000476367 OR51B2Q9Y5P1 312 aa11.22□□□□□ -0.61
CCNL1-217ENST00000476367 MGAM2Q2M2H8 2515 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 SNRPGP15A8MWD9 76 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 CCSO14618 274 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 PRAF2O60831 178 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 KIAA0141Q14154 515 aaPredicted RBP11.21□□□□□ -0.61
CCNL1-217ENST00000476367 PDLIM3Q53GG5 364 aaPredicted RBP11.21□□□□□ -0.61
CCNL1-217ENST00000476367 OR5T1Q8NG75 326 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 FAM110DQ8TAY7 271 aaPredicted RBP11.21□□□□□ -0.61
CCNL1-217ENST00000476367 SPIN2AQ99865 258 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 SPIN2BQ9BPZ2 258 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 ZNF355PQ9NSJ1 428 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 COA4Q9NYJ1 87 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 PRNDQ9UKY0 176 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 ZNF257Q9Y2Q1 563 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 TMED3Q9Y3Q3 217 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 DMRT1Q9Y5R6 373 aa11.21□□□□□ -0.61
CCNL1-217ENST00000476367 SNAPC5O75971 98 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 SPINK9Q5DT21 86 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 PRR31Q5SQ13 230 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 C12orf45Q8N5I9 185 aaPredicted RBP11.2□□□□□ -0.62
CCNL1-217ENST00000476367 RNF152Q8N8N0 203 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 OR5M8Q8NGP6 311 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 OR4A16Q8NH70 328 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 COQ8AQ8NI60 647 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 RNASE11Q8TAA1 199 aaKnown RBP11.2□□□□□ -0.62
CCNL1-217ENST00000476367 WDR89Q96FK6 387 aaPredicted RBP11.2□□□□□ -0.62
CCNL1-217ENST00000476367 MS4A10Q96PG2 267 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 COMMD5Q9GZQ3 224 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 ALG5Q9Y673 324 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 A0A1B0GU03 582 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 ATG12O94817 140 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 SULT1A3P0DMM9 295 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 SULT1A4P0DMN0 295 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 SLC25A6P12236 298 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 TPPP2P59282 170 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 HSPE1P61604 102 aaKnown RBP11.2□□□□□ -0.62
CCNL1-217ENST00000476367 DEFA5Q01523 94 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 SMCO1Q147U7 214 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 C8orf86Q6ZUL3 223 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 OR4F17Q8NGA8 305 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 OR1L8Q8NGR8 309 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 OR5B3Q8NH48 314 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 OR4F4Q96R69 305 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.2□□□□□ -0.62
CCNL1-217ENST00000476367 ZFP57Q9NU63 452 aa11.2□□□□□ -0.62
CCNL1-217ENST00000476367 CMYA5Q8N3K9 4069 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 NXPH3O95157 252 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 DHFRP00374 187 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 REG1AP05451 166 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 CTRB1P17538 263 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 RAB9AP51151 201 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 MFAP2P55001 183 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 PRCDQ00LT1 54 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 IL15RAQ13261 267 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 DEFB136Q30KP8 78 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 CTRB2Q6GPI1 263 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
CCNL1-217ENST00000476367 TTC9CQ8N5M4 171 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms