RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 TTC9CQ8N5M4 171 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 OR1L8Q8NGR8 309 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 ENKURQ8TC29 256 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 LSM10Q969L4 123 aaKnown RBP12.27□□□□□ -0.45
COL1A1-204ENST00000474644 MS4A10Q96PG2 267 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 NDUFA4L2Q9NRX3 87 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 ZFP57Q9NU63 452 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 COA4Q9NYJ1 87 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 FKBP11Q9NYL4 201 aa12.27□□□□□ -0.45
COL1A1-204ENST00000474644 TET2Q6N021 2002 aaPredicted RBP12.27□□□□□ -0.45
COL1A1-204ENST00000474644 A0A0B4J2A0 478 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 NPIPB5A8MRT5 1133 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 RBMXL2O75526 392 aaKnown RBP12.26□□□□□ -0.45
COL1A1-204ENST00000474644 TSPAN15O95858 294 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 TRAPPC2P0DI81 140 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 TRAPPC2BP0DI82 140 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 DEFA1P59665 94 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 DEFA3P59666 94 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 DHRS2Q13268 280 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 KIAA0141Q14154 515 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-204ENST00000474644 C4orf46Q504U0 113 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 Q6ZRM9 215 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 C19orf35Q6ZS72 473 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 LYZL2Q7Z4W2 148 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 LYG2Q86SG7 212 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 LRTM2Q8N967 370 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 OR10W1Q8NGF6 305 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 GPR146Q96CH1 333 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 SRSF8Q9BRL6 282 aaKnown RBP12.26□□□□□ -0.45
COL1A1-204ENST00000474644 HINT2Q9BX68 163 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 SLA2Q9H6Q3 261 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 ZNF355PQ9NSJ1 428 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 SHPKQ9UHJ6 478 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 ZNF257Q9Y2Q1 563 aa12.26□□□□□ -0.45
COL1A1-204ENST00000474644 BRI3O95415 125 aa12.25□□□□□ -0.45
COL1A1-204ENST00000474644 TRGV3P03979 118 aa12.25□□□□□ -0.45
COL1A1-204ENST00000474644 REG1AP05451 166 aa12.25□□□□□ -0.45
COL1A1-204ENST00000474644 PSMB6P28072 239 aa12.25□□□□□ -0.45
COL1A1-204ENST00000474644 TPPP2P59282 170 aa12.25□□□□□ -0.45
COL1A1-204ENST00000474644 WT1-ASQ06250 92 aa12.25□□□□□ -0.45
COL1A1-204ENST00000474644 NMSQ5H8A3 153 aa12.25□□□□□ -0.45
COL1A1-204ENST00000474644 NRARPQ7Z6K4 114 aa12.25□□□□□ -0.45
COL1A1-204ENST00000474644 ZNF491Q8N8L2 437 aa12.25□□□□□ -0.45
COL1A1-204ENST00000474644 KLHL30-AS1Q8NEE0 82 aa12.25□□□□□ -0.45
COL1A1-204ENST00000474644 UBE2E2Q96LR5 201 aa12.25□□□□□ -0.45
COL1A1-204ENST00000474644 ALX4Q9H161 411 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-204ENST00000474644 CACNG5Q9UF02 275 aa12.25□□□□□ -0.45
COL1A1-204ENST00000474644 PIGBOS1A0A0B4J2F0 54 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 DUXBA0A1W2PPF3 345 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 NUDT19A8MXV4 375 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 ST8SIA3O43173 380 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 DUS4LO95620 317 aaKnown RBP12.24□□□□□ -0.45
COL1A1-204ENST00000474644 PRH1P02810 166 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 CRYGCP07315 174 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 H2AFB2P0C5Z0 115 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 CTRB1P17538 263 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 CDX1P47902 265 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-204ENST00000474644 MECP2P51608 486 aaKnown RBP12.24□□□□□ -0.45
COL1A1-204ENST00000474644 RAB25P57735 213 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 HSPE1P61604 102 aaKnown RBP12.24□□□□□ -0.45
COL1A1-204ENST00000474644 PRCDQ00LT1 54 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 DEFA5Q01523 94 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 AARDQ4LEZ3 155 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 CTRB2Q6GPI1 263 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 C8orf86Q6ZUL3 223 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 HSD17B13Q7Z5P4 300 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-204ENST00000474644 GNB4Q9HAV0 340 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 MGAM2Q2M2H8 2515 aa12.24□□□□□ -0.45
COL1A1-204ENST00000474644 OR13C7P0DN81 318 aa12.23□□□□□ -0.45
COL1A1-204ENST00000474644 SPINK9Q5DT21 86 aa12.23□□□□□ -0.45
COL1A1-204ENST00000474644 PRR31Q5SQ13 230 aa12.23□□□□□ -0.45
COL1A1-204ENST00000474644 DUSP18Q8NEJ0 188 aa12.23□□□□□ -0.45
COL1A1-204ENST00000474644 OR4F17Q8NGA8 305 aa12.23□□□□□ -0.45
COL1A1-204ENST00000474644 OR52B4Q8NGK2 314 aa12.23□□□□□ -0.45
COL1A1-204ENST00000474644 C4orf3Q8WVX3 66 aa12.23□□□□□ -0.45
COL1A1-204ENST00000474644 OR4F4Q96R69 305 aa12.23□□□□□ -0.45
COL1A1-204ENST00000474644 PDCD10Q9BUL8 212 aa12.23□□□□□ -0.45
COL1A1-204ENST00000474644 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-204ENST00000474644 TRRAPQ9Y4A5 3859 aa12.22□□□□□ -0.45
COL1A1-204ENST00000474644 TRBV9A0A0B4J1U6 114 aa12.22□□□□□ -0.45
COL1A1-204ENST00000474644 DHFRP00374 187 aa12.22□□□□□ -0.45
COL1A1-204ENST00000474644 IFNA17P01571 189 aa12.22□□□□□ -0.45
COL1A1-204ENST00000474644 SULT1A3P0DMM9 295 aa12.22□□□□□ -0.45
COL1A1-204ENST00000474644 SULT1A4P0DMN0 295 aa12.22□□□□□ -0.45
COL1A1-204ENST00000474644 RHOGP84095 191 aa12.22□□□□□ -0.45
COL1A1-204ENST00000474644 COQ8AQ8NI60 647 aa12.22□□□□□ -0.45
COL1A1-204ENST00000474644 OR5B12Q96R08 314 aa12.22□□□□□ -0.45
COL1A1-204ENST00000474644 SEC22CQ9BRL7 303 aa12.22□□□□□ -0.45
COL1A1-204ENST00000474644 PLEKHA3Q9HB20 300 aa12.22□□□□□ -0.45
COL1A1-204ENST00000474644 TMED3Q9Y3Q3 217 aa12.22□□□□□ -0.45
COL1A1-204ENST00000474644 IGLV11-55A0A075B6I3 123 aa12.21□□□□□ -0.45
COL1A1-204ENST00000474644 IGHV3-11P01762 117 aa12.21□□□□□ -0.45
COL1A1-204ENST00000474644 HOXB5P09067 269 aa12.21□□□□□ -0.45
COL1A1-204ENST00000474644 SMCO1Q147U7 214 aa12.21□□□□□ -0.45
COL1A1-204ENST00000474644 KLK9Q2XQG4 91 aa12.21□□□□□ -0.45
COL1A1-204ENST00000474644 DEFB136Q30KP8 78 aa12.21□□□□□ -0.45
COL1A1-204ENST00000474644 ETV3LQ6ZN32 361 aa12.21□□□□□ -0.45
COL1A1-204ENST00000474644 MITD1Q8WV92 249 aa12.21□□□□□ -0.45
COL1A1-204ENST00000474644 FANCD2OSQ96PS1 177 aa12.21□□□□□ -0.45
COL1A1-204ENST00000474644 PALMDQ9NP74 551 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms