RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 VAMP2P63027 116 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 NDPQ00604 133 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 RAB32Q13637 225 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 MRGPRG-AS1Q2M3A8 158 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 CXorf66Q5JRM2 361 aaPredicted RBP6.6□□□□□ -1.35
CNN3-205ENST00000474409 ZNF562Q6V9R5 426 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 OR2T35Q8NGX2 323 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 DTD1Q8TEA8 209 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 CHAC2Q8WUX2 184 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 PPP1R1CQ8WVI7 109 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 CIB3Q96Q77 187 aaPredicted RBP6.6□□□□□ -1.35
CNN3-205ENST00000474409 RBKSQ9H477 322 aa6.6□□□□□ -1.35
CNN3-205ENST00000474409 RANGRFQ9HD47 186 aaPredicted RBP6.6□□□□□ -1.35
CNN3-205ENST00000474409 MSGN1A6NI15 193 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 AP4M1O00189 453 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 SYNGR2O43760 224 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 IGHG2P01859 326 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 RLN2P04090 185 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 REG1AP05451 166 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 VDAC2P45880 294 aaPredicted RBP6.59□□□□□ -1.35
CNN3-205ENST00000474409 POLR2GP62487 172 aaKnown RBP eCLIP6.59□□□□□ -1.35
CNN3-205ENST00000474409 SSBP2P81877 361 aaPredicted RBP6.59□□□□□ -1.35
CNN3-205ENST00000474409 ERHP84090 104 aaKnown RBP6.59□□□□□ -1.35
CNN3-205ENST00000474409 SRSF4Q08170 494 aaKnown RBP6.59□□□□□ -1.35
CNN3-205ENST00000474409 FGL1Q08830 312 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 TMEM95Q3KNT9 176 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 AARDQ4LEZ3 155 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 UNQ5815/PRO19632Q6UWF5 114 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 HSD17B13Q7Z5P4 300 aaPredicted RBP6.59□□□□□ -1.35
CNN3-205ENST00000474409 OR2T6Q8NHC8 308 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 SGMS2Q8NHU3 365 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 THAP6Q8TBB0 222 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 WDR89Q96FK6 387 aaPredicted RBP6.59□□□□□ -1.35
CNN3-205ENST00000474409 HIPK2Q9H2X6 1198 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 ZNF702PQ9H963 129 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 HEYLQ9NQ87 328 aaPredicted RBP6.59□□□□□ -1.35
CNN3-205ENST00000474409 NDUFA4L2Q9NRX3 87 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 MBD2Q9UBB5 411 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 PAIP2BQ9ULR5 123 aaKnown RBP6.59□□□□□ -1.35
CNN3-205ENST00000474409 FBXO7Q9Y3I1 522 aa6.59□□□□□ -1.35
CNN3-205ENST00000474409 FXYD6-FXYD2A0A087WZ82 144 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 IGLC7A0M8Q6 106 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 CGB1A6NKQ9 187 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 TEX22C9J3V5 150 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 E7EUB6 86 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 H3BP45 60 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 PFDN1O60925 122 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 MPC2O95563 127 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 LY86O95711 162 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 OR13C7P0DN81 318 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 AREGP15514 252 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 PSMB6P28072 239 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 RPL23AP62750 156 aaKnown RBP6.58□□□□□ -1.36
CNN3-205ENST00000474409 SRSF2Q01130 221 aaKnown RBP6.58□□□□□ -1.36
CNN3-205ENST00000474409 ID3Q02535 119 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 TMEM267Q0VDI3 215 aaPredicted RBP6.58□□□□□ -1.36
CNN3-205ENST00000474409 PDLIM3Q53GG5 364 aaPredicted RBP6.58□□□□□ -1.36
CNN3-205ENST00000474409 LFNGQ8NES3 379 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 SLC24A4Q8NFF2 622 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 OR10W1Q8NGF6 305 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 DCUN1D4Q92564 292 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 RAB40CQ96S21 281 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 SRSF8Q9BRL6 282 aaKnown RBP6.58□□□□□ -1.36
CNN3-205ENST00000474409 LINC00527Q9UJ94 153 aa6.58□□□□□ -1.36
CNN3-205ENST00000474409 TRAV41A0A0B4J266 112 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 A0A1B0GW64 132 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 LINC01548A6NM66 108 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 E5RGE8 158 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 G3V318 75 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 SMLR1H3BR10 107 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 CYB5BO43169 146 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 TSC22D2O75157 780 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 DEDDO75618 318 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 IFNA10P01566 189 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 DEFA4P12838 97 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 NPY1RP25929 384 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 SNCAP37840 140 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 HTR2BP41595 481 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 CAV2P51636 162 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 SUB1P53999 127 aaKnown RBP eCLIP6.57□□□□□ -1.36
CNN3-205ENST00000474409 RPP30P78346 268 aaKnown RBP6.57□□□□□ -1.36
CNN3-205ENST00000474409 WT1-ASQ06250 92 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 IL15RAQ13261 267 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 SPANXN5Q5MJ07 72 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 C11orf87Q6NUJ2 197 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 PRSS54Q6PEW0 395 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 Q6ZS46 218 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 Q6ZSV7 163 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 TCTE3Q8IZS6 198 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 STPG2Q8N412 459 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 OR2C3Q8N628 320 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 ST6GAL2Q96JF0 529 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 TMEM68Q96MH6 324 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 NOL4LQ96MY1 436 aaPredicted RBP6.57□□□□□ -1.36
CNN3-205ENST00000474409 GON7Q9BXV9 100 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 ZC4H2Q9NQZ6 224 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 ZNF355PQ9NSJ1 428 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 PSENENQ9NZ42 101 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 OR5AC2Q9NZP5 309 aa6.57□□□□□ -1.36
CNN3-205ENST00000474409 WSB1Q9Y6I7 421 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms