RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 H0Y980 276 aa13.61□□□□□ -0.23
UPF3A-203ENST00000474056 FRMD6-AS1P0C7T7 363 aa13.61□□□□□ -0.23
UPF3A-203ENST00000474056 PGAM2P15259 253 aa13.61□□□□□ -0.23
UPF3A-203ENST00000474056 WT1-ASQ06250 92 aa13.61□□□□□ -0.23
UPF3A-203ENST00000474056 SBSPONQ8IVN8 264 aa13.61□□□□□ -0.23
UPF3A-203ENST00000474056 CADM3Q8N126 398 aa13.61□□□□□ -0.23
UPF3A-203ENST00000474056 GDPD1Q8N9F7 314 aa13.61□□□□□ -0.23
UPF3A-203ENST00000474056 SEC22AQ96IW7 307 aa13.61□□□□□ -0.23
UPF3A-203ENST00000474056 HINT2Q9BX68 163 aa13.61□□□□□ -0.23
UPF3A-203ENST00000474056 CCDC59Q9P031 241 aaKnown RBP13.61□□□□□ -0.23
UPF3A-203ENST00000474056 U3KQK5 164 aa13.61□□□□□ -0.23
UPF3A-203ENST00000474056 SNAPC5O75971 98 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 CD74P04233 296 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 SERPINE2P07093 398 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 OR13C7P0DN81 318 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 PI3P19957 117 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 PTBP1P26599 531 aaKnown RBP eCLIP13.6□□□□□ -0.23
UPF3A-203ENST00000474056 MECP2P51608 486 aaKnown RBP13.6□□□□□ -0.23
UPF3A-203ENST00000474056 PPP5CP53041 499 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 TMBIM6P55061 237 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 RND3P61587 244 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 Q8N402 240 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 ARRDC1Q8N5I2 433 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 TMEM229BQ8NBD8 167 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 C15orf40Q8WUR7 153 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 LSM10Q969L4 123 aaKnown RBP13.6□□□□□ -0.23
UPF3A-203ENST00000474056 CXorf58Q96LI9 332 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 WWC2-AS2Q96NR7 200 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 BCL7BQ9BQE9 202 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 THAP7Q9BT49 309 aaPredicted RBP13.6□□□□□ -0.23
UPF3A-203ENST00000474056 PRNDQ9UKY0 176 aa13.6□□□□□ -0.23
UPF3A-203ENST00000474056 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 C15orf61A6NNL5 157 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 GABARAPH6UMI1 98 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 IGHV4-30-4P0DP06 118 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 TBPP20226 339 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 RPL5P46777 297 aaKnown RBP13.59□□□□□ -0.23
UPF3A-203ENST00000474056 TAS2R19P59542 299 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 LCN12Q6JVE5 192 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 HSD17B13Q7Z5P4 300 aaPredicted RBP13.59□□□□□ -0.23
UPF3A-203ENST00000474056 GPHB5Q86YW7 130 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 ZNF502Q8TBZ5 544 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 MRGPRFQ96AM1 343 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 ZNF486Q96H40 463 aaPredicted RBP13.59□□□□□ -0.23
UPF3A-203ENST00000474056 TSC22D3Q99576 134 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 ZC4H2Q9NQZ6 224 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 TMEM14BQ9NUH8 114 aa13.59□□□□□ -0.23
UPF3A-203ENST00000474056 C2orf70A6NJV1 201 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 LGALS9O00182 355 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 RAB3DO95716 219 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 CLEC3BP05452 202 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 GPR183P32249 361 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 MFAP2P55001 183 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 PIGPP57054 158 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 CD300EQ496F6 205 aaPredicted RBP13.58□□□□□ -0.24
UPF3A-203ENST00000474056 SLC25A24Q6NUK1 477 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 FAAP20Q6NZ36 180 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 STEAP1BQ6NZ63 245 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 H2BFWTQ7Z2G1 175 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 DIRAS2Q96HU8 199 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 THYN1Q9P016 225 aa13.58□□□□□ -0.24
UPF3A-203ENST00000474056 F11RQ9Y624 299 aaKnown RBP13.58□□□□□ -0.24
UPF3A-203ENST00000474056 H3BMQ9 156 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 FOLR2P14207 255 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 MRPS10P82664 201 aaKnown RBP13.57□□□□□ -0.24
UPF3A-203ENST00000474056 IL18Q14116 193 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 SCGB2B2Q4G0G5 96 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 SGPP2Q8IWX5 399 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 OR2K2Q8NGT1 345 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 OR5B3Q8NH48 314 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 DYNLRB2Q8TF09 96 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 SMIM4Q8WVI0 70 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 CACNG8Q8WXS5 425 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 ISOC1Q96CN7 298 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 TP53RKQ96S44 253 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 C6orf62Q9GZU0 229 aaPredicted RBP13.57□□□□□ -0.24
UPF3A-203ENST00000474056 FKBP11Q9NYL4 201 aa13.57□□□□□ -0.24
UPF3A-203ENST00000474056 KMT2CQ8NEZ4 4911 aaKnown RBP13.57□□□□□ -0.24
UPF3A-203ENST00000474056 IGHV3-21A0A0B4J1V1 117 aa13.56□□□□□ -0.24
UPF3A-203ENST00000474056 NOL3O60936 208 aaKnown RBP13.56□□□□□ -0.24
UPF3A-203ENST00000474056 SSBP1Q04837 148 aaKnown RBP13.56□□□□□ -0.24
UPF3A-203ENST00000474056 FAM106AQ4KMX7 169 aa13.56□□□□□ -0.24
UPF3A-203ENST00000474056 OR13C8Q8NGS7 320 aa13.56□□□□□ -0.24
UPF3A-203ENST00000474056 OR4A16Q8NH70 328 aa13.56□□□□□ -0.24
UPF3A-203ENST00000474056 TERB2Q8NHR7 220 aa13.56□□□□□ -0.24
UPF3A-203ENST00000474056 TMEM56Q96MV1 263 aa13.56□□□□□ -0.24
UPF3A-203ENST00000474056 SLIRPQ9GZT3 109 aaKnown RBP13.56□□□□□ -0.24
UPF3A-203ENST00000474056 C19orf73Q9NVV2 129 aa13.56□□□□□ -0.24
UPF3A-203ENST00000474056 STAB2Q8WWQ8 2551 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 IGHV3-35A0A0C4DH35 117 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 ZNF320A2RRD8 509 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 TMEM213A2RRL7 107 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 A8MWP6 167 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 A8MZ25 164 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 CTDSPLO15194 276 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 CYB5BO43169 146 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 IZUMO4Q1ZYL8 232 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 DEFB114Q30KQ6 69 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 UNQ9165/PRO28630Q6UXU0 137 aa13.55□□□□□ -0.24
UPF3A-203ENST00000474056 GTSCR1Q86UQ5 136 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms