RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 HTR2BP41595 481 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 NKX2-5P52952 324 aaPredicted RBP8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 ATP5IP56385 69 aaPredicted RBP8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 EIF5AP63241 154 aaKnown RBP8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 TMEM267Q0VDI3 215 aaPredicted RBP8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 IL15RAQ13261 267 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 ZNF345Q14585 488 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 Q6YL49 198 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 Q8N6K4 173 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 SLC24A4Q8NFF2 622 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 OR1S2Q8NGQ3 325 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 SRSF12Q8WXF0 261 aaKnown RBP8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 AJUBAQ96IF1 538 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 RITA1Q96K30 269 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 JMJD8Q96S16 334 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 SRSF8Q9BRL6 282 aaKnown RBP8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 PARP11Q9NR21 331 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 VPREB3Q9UKI3 123 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 TNFSF18Q9UNG2 199 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 U3KQ87 197 aa8.2□□□□□ -1.1
PRPF38A-202ENST00000474048 ITPR3Q14573 2671 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 A6NDX4 124 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 TAAR5O14804 337 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 HOXA3O43365 443 aaPredicted RBP8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 CRYBA1P05813 215 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 CRYGBP07316 175 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 OR13C7P0DN81 318 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 LYL1P12980 280 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 S100A11P31949 105 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 IER3P46695 156 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 SULT1A1P50225 295 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 PJVKQ0ZLH3 352 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 AARDQ4LEZ3 155 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 PDLIM3Q53GG5 364 aaPredicted RBP8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 Q5BKY6 102 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 OR8G2PQ6IF36 304 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 ZNF562Q6V9R5 426 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 SIGLECL1Q8N7X8 197 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 C5orf56Q8N8D9 126 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 Q8N9W7 124 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 OR10P1Q8NGE3 313 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 OR1L6Q8NGR2 347 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 PINX1Q96BK5 328 aaKnown RBP8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 RBMXL1Q96E39 390 aaKnown RBP8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 AQP10Q96PS8 301 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 ARPC5LQ9BPX5 153 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 NPFFR1Q9GZQ6 430 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 NDUFA4L2Q9NRX3 87 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 PDZD2O15018 2839 aa8.19□□□□□ -1.1
PRPF38A-202ENST00000474048 FAM24AA6NFZ4 105 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 MSGN1A6NI15 193 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 H0YIZ8 118 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 CORTO00230 105 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 DFFBO76075 338 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 IFNA5P01569 189 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 IL6RP08887 468 aaPredicted RBP8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 METTL15P1P0C7V9 234 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 CX3CL1P78423 397 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 EWSR1Q01844 656 aaKnown RBP eCLIP8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 KRTAP1-1Q07627 177 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 ZNF266Q14584 549 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 C10orf55Q5SWW7 151 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 TMUB2Q71RG4 321 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 SLC35E3Q7Z769 313 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 TMEM86BQ8N661 226 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 TMEM217Q8N7C4 229 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 OR11H4Q8NGC9 324 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 RNF126Q9BV68 326 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 ZNF471Q9BX82 626 aaPredicted RBP8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 SOX21Q9Y651 276 aaPredicted RBP8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 ITPR2Q14571 2701 aa8.18□□□□□ -1.1
PRPF38A-202ENST00000474048 CSMD2Q7Z408 3487 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 RPS10-NUDT3A0A1W2PQS6 291 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 SMCO3A2RU48 225 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 TRIM77I1YAP6 450 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 BCL2L11O43521 198 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 SCGB2A1O75556 95 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 CST7O76096 145 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 HKR1P10072 659 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 MYOD1P15172 320 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 SLC38A11Q08AI6 406 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 ECSCRQ19T08 205 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 ETFRF1Q6IPR1 90 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 ETV3LQ6ZN32 361 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 C9orf62Q8N4C0 152 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 KCNRGQ8N5I3 272 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 TMEM252Q8N6L7 170 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 SCGB1C1Q8TD33 95 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 TMEM68Q96MH6 324 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 SMR3AQ99954 134 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 SMIM3Q9BZL3 60 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 PRSS22Q9GZN4 317 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 ZNF355PQ9NSJ1 428 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 THYN1Q9P016 225 aa8.17□□□□□ -1.1
PRPF38A-202ENST00000474048 FLNAP21333 2647 aaKnown RBP8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 IGSF23A1L1A6 192 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 G3V3Q6 166 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 FCN1O00602 326 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 REG1AP05451 166 aa8.16□□□□□ -1.1
PRPF38A-202ENST00000474048 APELAP0DMC3 54 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms