RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 C6orf62Q9GZU0 229 aaPredicted RBP9.92□□□□□ -0.82
SHROOM3-204ENST00000473602 FKBP11Q9NYL4 201 aa9.92□□□□□ -0.82
SHROOM3-204ENST00000473602 SORL1Q92673 2214 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 TRAV3A0A0B4J244 114 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 IGLC7A0M8Q6 106 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 CYB5BO43169 146 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 SNAPC5O75971 98 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 OR2J3O76001 311 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 RAB3DO95716 219 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 DEFA4P12838 97 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 PGAM2P15259 253 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 RPA2P15927 270 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 G6PCP35575 357 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 IL18Q14116 193 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 STEAP1BQ6NZ63 245 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 OR9G4Q8NGQ1 327 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 OR1L8Q8NGR8 309 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 TERB2Q8NHR7 220 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 FANCD2OSQ96PS1 177 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 RSL24D1Q9UHA3 163 aaKnown RBP9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 FBXL7Q9UJT9 491 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 PRNDQ9UKY0 176 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 CEPT1Q9Y6K0 416 aa9.91□□□□□ -0.82
SHROOM3-204ENST00000473602 IGLV11-55A0A075B6I3 123 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 TRBV12-3P01733 135 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 TRAPPC2P0DI81 140 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 TRAPPC2BP0DI82 140 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 MYOD1P15172 320 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 CCDC71LQ8N9Z2 235 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 OR5B3Q8NH48 314 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 MCFD2Q8NI22 146 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 ZFAND1Q8TCF1 268 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 LSM10Q969L4 123 aaKnown RBP9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 CXorf58Q96LI9 332 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 NXF2Q9GZY0 626 aaKnown RBP9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 SIGLEC8Q9NYZ4 499 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 THYN1Q9P016 225 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 PEMTQ9UBM1 199 aa9.9□□□□□ -0.82
SHROOM3-204ENST00000473602 LCE6AA0A183 80 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 TEX50A0A1B0GTY4 177 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 H0Y980 276 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 BMPR1BO00238 502 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 GSTZ1O43708 216 aaPredicted RBP9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 B3GALNT1O75752 331 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 LY86O95711 162 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 IGLV1-51P01701 117 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 SERPINE2P07093 398 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 AKAIN1P0CW23 69 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 LYL1P12980 280 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 PIGPP57054 158 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 SYNJ2BPP57105 145 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 SURF2Q15527 256 aaPredicted RBP9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 GDPD1Q8N9F7 314 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 OR4D10Q8NGI6 311 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 EEF1AKMT3Q96AZ1 226 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 SEC22AQ96IW7 307 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 TMEM56Q96MV1 263 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 NDUFA4L2Q9NRX3 87 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 TMEM14BQ9NUH8 114 aa9.89□□□□□ -0.83
SHROOM3-204ENST00000473602 TRBV7-1A0A0A6YYK4 115 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 CCDC160A6NGH7 325 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 C15orf61A6NNL5 157 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 DISC1C4P0D8 188 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 ZNF701M0R085 212 aaPredicted RBP9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 GGCTO75223 188 aaKnown RBP9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 ATG12O94817 140 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 NDUFB8O95169 186 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 REG1AP05451 166 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 CTSDP07339 412 aaPredicted RBP9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 GP9P14770 177 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 SPNP16150 400 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 PPP5CP53041 499 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 SCGB2B2Q4G0G5 96 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 C19orf35Q6ZS72 473 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 H2BFWTQ7Z2G1 175 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 OR1L6Q8NGR2 347 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 CCDC140Q96MF4 163 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 RCHY1Q96PM5 261 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 PALMDQ9NP74 551 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 COPZ2Q9P299 210 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 OR51B2Q9Y5P1 312 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 SMAD5-AS1Q9Y6J3 95 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 STARD9Q9P2P6 4700 aa9.88□□□□□ -0.83
SHROOM3-204ENST00000473602 HYDINQ4G0P3 5121 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 C3orf85A0A1B0GTC6 90 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 FABP12A6NFH5 140 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 LGALS9O00182 355 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 IGKV1-39P01597 117 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 IGKV1D-39P04432 117 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 OR13C7P0DN81 318 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 PI3P19957 117 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 TNFSF8P32971 234 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 WT1-ASQ06250 92 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 IL34Q6ZMJ4 242 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 SBSPONQ8IVN8 264 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 OR10W1Q8NGF6 305 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 OR13C8Q8NGS7 320 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 OR4A16Q8NH70 328 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 MRGPRFQ96AM1 343 aa9.87□□□□□ -0.83
SHROOM3-204ENST00000473602 PRRT1Q99946 306 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms