RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 RPRMLQ8N4K4 120 aa8.42□□□□□ -1.06
APTX-216ENST00000472896 RDH5Q92781 318 aa8.42□□□□□ -1.06
APTX-216ENST00000472896 TNFRSF14Q92956 283 aa8.42□□□□□ -1.06
APTX-216ENST00000472896 IL19Q9UHD0 177 aa8.42□□□□□ -1.06
APTX-216ENST00000472896 OR2W1Q9Y3N9 320 aa8.42□□□□□ -1.06
APTX-216ENST00000472896 RNF114Q9Y508 228 aa8.42□□□□□ -1.06
APTX-216ENST00000472896 CHD3Q12873 2000 aaKnown RBP8.41□□□□□ -1.06
APTX-216ENST00000472896 TRAV34A0A0B4J273 112 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 AQP7P3A6NL99 342 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 C9JCJ5 164 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 PRRG2O14669 202 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 TNFSF11O14788 317 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 HMGB3O15347 200 aaKnown RBP8.41□□□□□ -1.06
APTX-216ENST00000472896 OR7C1O76099 320 aaPredicted RBP8.41□□□□□ -1.06
APTX-216ENST00000472896 SP1P08047 785 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 CRYGSP22914 178 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 BMI1P35226 326 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 IER3P46695 156 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 FAM71F2Q6NXP2 309 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 PRIMA1Q86XR5 153 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 OR4F17Q8NGA8 305 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 OR10P1Q8NGE3 313 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 RNF138Q8WVD3 245 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 NANOS1Q8WY41 292 aaKnown RBP8.41□□□□□ -1.06
APTX-216ENST00000472896 BCL2L2Q92843 193 aaPredicted RBP8.41□□□□□ -1.06
APTX-216ENST00000472896 NABP1Q96AH0 204 aa8.41□□□□□ -1.06
APTX-216ENST00000472896 APOBEC3DQ96AK3 386 aaPredicted RBP8.41□□□□□ -1.06
APTX-216ENST00000472896 LIN7CQ9NUP9 197 aaKnown RBP8.41□□□□□ -1.06
APTX-216ENST00000472896 IGLV3-32A0A0A0MS00 114 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 NPIPB11E5RHQ5 1161 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 EFNA2O43921 213 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 NEURL1O76050 574 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 CA2P00918 260 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 IGKV1-39P01597 117 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 HLA-DQA1P01909 254 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 IGKV1D-39P04432 117 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 OR10J4P0C629 311 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 LINC00869P0C866 280 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 CD46P15529 392 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 ATP5G3P48201 142 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 ZNF83P51522 516 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 PSG4Q00888 419 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 TGFBR3Q03167 851 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 OR4A47Q6IF82 309 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 SCCPDHQ8NBX0 429 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 ZNF114Q8NC26 417 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 FAM57AQ8TBR7 257 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 NINJ1Q92982 152 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 NPCDR1Q9BY65 106 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 PLEK2Q9NYT0 353 aa8.4□□□□□ -1.06
APTX-216ENST00000472896 F2Z2F3 143 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 H0YJW9 148 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 TAX1BP3O14907 124 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 IGKV1-5P01602 117 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 PMCHP20382 165 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 THBS3P49746 956 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 GFRA1P56159 465 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 SELENOVP59797 346 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 VHLLQ6RSH7 139 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 C12orf54Q6X4T0 127 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 LINC00596Q86U02 117 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 FAM58AQ8N1B3 248 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 DEFB125Q8N687 156 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 OCC1Q8TAD7 63 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 ZNF596Q8TC21 504 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 RTTNQ86VV8 2226 aa8.4□□□□□ -1.07
APTX-216ENST00000472896 TRGV10A0A0A0MS01 117 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 IGKV1-6A0A0C4DH72 117 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 ZNF816-ZNF321PA0A0X1KG74 233 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 A0A1W2PPV4 95 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 PMS2P5A8MQ11 134 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 DHHO43323 396 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 CRYAAP02489 173 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 PSG1P11464 419 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 REG1BP48304 166 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 CLDN17P56750 224 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 FGF12P61328 243 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 CX3CL1P78423 397 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 FAM27BQ5VT28 67 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 Q6ZVH6 145 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 MMD2Q8IY49 270 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 BATF2Q8N1L9 274 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 TMEM178AQ8NBL3 297 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 OR10G3Q8NGC4 313 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 OR52L2PQ8NGH6 319 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 OR51H1Q8NH63 302 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 TSKUQ8WUA8 353 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 C11orf52Q96A22 123 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 ST20Q9HBF5 79 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 C1RLQ9NZP8 487 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 NAT8BQ9UHF3 227 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 RNF24Q9Y225 148 aa8.39□□□□□ -1.07
APTX-216ENST00000472896 FN1P02751 2386 aaKnown RBP8.39□□□□□ -1.07
APTX-216ENST00000472896 CORTO00230 105 aa8.38□□□□□ -1.07
APTX-216ENST00000472896 CD5LO43866 347 aa8.38□□□□□ -1.07
APTX-216ENST00000472896 MPDU1O75352 247 aa8.38□□□□□ -1.07
APTX-216ENST00000472896 CXorf1O96002 111 aa8.38□□□□□ -1.07
APTX-216ENST00000472896 AMY1AP04745 511 aa8.38□□□□□ -1.07
APTX-216ENST00000472896 SCGB1A1P11684 91 aa8.38□□□□□ -1.07
APTX-216ENST00000472896 MLF1P58340 268 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms