RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 INTS1Q8N201 2190 aaKnown RBP1.15□□□□□ -2.22
PTCD3-209ENST00000472044 TRBV6-5A0A0K0K1A5 114 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 TRBV10-2A0A0K0K1G8 114 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 TRAPPC13A5PLN9 417 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 INMT-MINDY4F8WBC2 141 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 KCNK1O00180 336 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 AHSA1O95433 338 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 IGHV3-7P01780 117 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 ANGP03950 147 aaKnown RBP1.15□□□□□ -2.23
PTCD3-209ENST00000472044 SULT1A3P0DMM9 295 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 SULT1A4P0DMN0 295 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 NFYAP23511 347 aaPredicted RBP1.15□□□□□ -2.23
PTCD3-209ENST00000472044 HLA-DMBP28068 263 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 NKX2-5P52952 324 aaPredicted RBP1.15□□□□□ -2.23
PTCD3-209ENST00000472044 TCL1AP56279 114 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 RPL18Q07020 188 aaKnown RBP1.15□□□□□ -2.23
PTCD3-209ENST00000472044 PMAIP1Q13794 54 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 NNATQ16517 81 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 MOGQ16653 247 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 Q1T7F1 81 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 ARHGAP11BQ3KRB8 267 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 LPCAT4Q643R3 524 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 ALKAL1Q6UXT8 129 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 MRPS26Q9BYN8 205 aaKnown RBP1.15□□□□□ -2.23
PTCD3-209ENST00000472044 FAM96AQ9H5X1 160 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 IL36BQ9NZH7 164 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 DOCK5Q9H7D0 1870 aa1.15□□□□□ -2.23
PTCD3-209ENST00000472044 IRGMA1A4Y4 181 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 SLC22A1O15245 554 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 IFNA5P01569 189 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 TRGC1P0CF51 173 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 HIST1H1EP10412 219 aaKnown RBP1.14□□□□□ -2.23
PTCD3-209ENST00000472044 CCL20P78556 96 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 OR2F1Q13607 317 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 ELOBQ15370 118 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 NDUFA5Q16718 116 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 GUK1Q16774 197 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 SYPL2Q5VXT5 272 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 UNQ6190/PRO20217Q6UXQ8 127 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 FP248Q71RG6 208 aaPredicted RBP1.14□□□□□ -2.23
PTCD3-209ENST00000472044 DCXRQ7Z4W1 244 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 IQCF2Q8IXL9 164 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 TMEM86BQ8N661 226 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 ZNF676Q8N7Q3 588 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 C9orf163Q8N9P6 203 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 SLC35B4Q969S0 331 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 RETNLBQ9BQ08 111 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 EFCAB1Q9HAE3 211 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 GUCA1BQ9UMX6 200 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 COL6A6A6NMZ7 2263 aa1.14□□□□□ -2.23
PTCD3-209ENST00000472044 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.13□□□□□ -2.23
PTCD3-209ENST00000472044 A0A0J9YY10 115 aa1.13□□□□□ -2.23
PTCD3-209ENST00000472044 A0A1B0GX78 115 aa1.13□□□□□ -2.23
PTCD3-209ENST00000472044 IBA57-AS1B1ANH7 110 aa1.13□□□□□ -2.23
PTCD3-209ENST00000472044 EEF1E1-BLOC1S5C9J1V9 151 aa1.13□□□□□ -2.23
PTCD3-209ENST00000472044 ORC5O43913 435 aa1.13□□□□□ -2.23
PTCD3-209ENST00000472044 MRPS14O60783 128 aaKnown RBP1.13□□□□□ -2.23
PTCD3-209ENST00000472044 NIPSNAP2O75323 286 aa1.13□□□□□ -2.23
PTCD3-209ENST00000472044 CRPP02741 224 aa1.13□□□□□ -2.23
PTCD3-209ENST00000472044 PRM2P04554 102 aa1.13□□□□□ -2.23
PTCD3-209ENST00000472044 RPSAP08865 295 aaKnown RBP1.13□□□□□ -2.23
PTCD3-209ENST00000472044 ZNF80P51504 273 aaPredicted RBP1.13□□□□□ -2.23
PTCD3-209ENST00000472044 FXYD2P54710 66 aa1.13□□□□□ -2.23
PTCD3-209ENST00000472044 IBA57Q5T440 356 aaKnown RBP1.13□□□□□ -2.23
PTCD3-209ENST00000472044 Q6ZS49 121 aa1.13□□□□□ -2.23
PTCD3-209ENST00000472044 DHFR2Q86XF0 187 aa1.13□□□□□ -2.23
PTCD3-209ENST00000472044 ERMAPQ96PL5 475 aaPredicted RBP1.13□□□□□ -2.23
PTCD3-209ENST00000472044 LHFPL6Q9Y693 200 aa1.13□□□□□ -2.23
PTCD3-209ENST00000472044 MED12LQ86YW9 2145 aa1.12□□□□□ -2.23
PTCD3-209ENST00000472044 TRBV20OR9-2A0A075B6H5 130 aa1.12□□□□□ -2.23
PTCD3-209ENST00000472044 FABP5P3A8MUU1 101 aa1.12□□□□□ -2.23
PTCD3-209ENST00000472044 UBE2IP63279 158 aaKnown RBP1.12□□□□□ -2.23
PTCD3-209ENST00000472044 GRK1Q15835 563 aa1.12□□□□□ -2.23
PTCD3-209ENST00000472044 IMPG1Q17R60 797 aa1.12□□□□□ -2.23
PTCD3-209ENST00000472044 PTRHD1Q6GMV3 140 aaKnown RBP1.12□□□□□ -2.23
PTCD3-209ENST00000472044 FAM173BQ6P4H8 233 aa1.12□□□□□ -2.23
PTCD3-209ENST00000472044 OR8B3Q8NGG8 313 aa1.12□□□□□ -2.23
PTCD3-209ENST00000472044 MRPL30Q8TCC3 161 aaKnown RBP1.12□□□□□ -2.23
PTCD3-209ENST00000472044 OR52E6Q96RD3 313 aa1.12□□□□□ -2.23
PTCD3-209ENST00000472044 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
PTCD3-209ENST00000472044 WDR61Q9GZS3 305 aaKnown RBP1.12□□□□□ -2.23
PTCD3-209ENST00000472044 PARVGQ9HBI0 331 aa1.12□□□□□ -2.23
PTCD3-209ENST00000472044 CISHQ9NSE2 258 aa1.12□□□□□ -2.23
PTCD3-209ENST00000472044 MED9Q9NWA0 146 aa1.12□□□□□ -2.23
PTCD3-209ENST00000472044 FLG2Q5D862 2391 aaPredicted RBP1.12□□□□□ -2.23
PTCD3-209ENST00000472044 KIF24Q5T7B8 1368 aa1.11□□□□□ -2.23
PTCD3-209ENST00000472044 TONSLQ96HA7 1378 aa1.11□□□□□ -2.23
PTCD3-209ENST00000472044 GGT3PA6NGU5 568 aa1.11□□□□□ -2.23
PTCD3-209ENST00000472044 M0R036 132 aa1.11□□□□□ -2.23
PTCD3-209ENST00000472044 METTL15P1P0C7V9 234 aa1.11□□□□□ -2.23
PTCD3-209ENST00000472044 LYNX1P0DP58 116 aa1.11□□□□□ -2.23
PTCD3-209ENST00000472044 IFITM2Q01629 132 aa1.11□□□□□ -2.23
PTCD3-209ENST00000472044 CCDC122Q5T0U0 273 aa1.11□□□□□ -2.23
PTCD3-209ENST00000472044 RPS19BP1Q86WX3 136 aaKnown RBP1.11□□□□□ -2.23
PTCD3-209ENST00000472044 LRRC25Q8N386 305 aaPredicted RBP1.11□□□□□ -2.23
PTCD3-209ENST00000472044 OR51D1Q8NGF3 324 aa1.11□□□□□ -2.23
PTCD3-209ENST00000472044 OR2T4Q8NH00 348 aa1.11□□□□□ -2.23
PTCD3-209ENST00000472044 IMP4Q96G21 291 aaKnown RBP1.11□□□□□ -2.23
PTCD3-209ENST00000472044 BAIAP2Q9UQB8 552 aa1.11□□□□□ -2.23
PTCD3-209ENST00000472044 MICAL3Q7RTP6 2002 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms