RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 GALNT14Q96FL9 552 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 ATP6V0BQ99437 205 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 MGLLQ99685 303 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 KRTAP17-1Q9BYP8 105 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 ZNF436Q9C0F3 470 aaPredicted RBP6.77□□□□□ -1.33
CPSF4-211ENST00000471455 COMMD5Q9GZQ3 224 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 ATG5Q9H1Y0 275 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 TAS2R8Q9NYW2 309 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 SPATA2Q9UM82 520 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 SELENOKQ9Y6D0 94 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 S4R3C0 116 aa6.77□□□□□ -1.33
CPSF4-211ENST00000471455 HERC2O95714 4834 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 RBFOX2O43251 390 aaKnown RBP eCLIP6.76□□□□□ -1.33
CPSF4-211ENST00000471455 TGOLN2O43493 480 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 PLA2G1BP04054 148 aaKnown RBP6.76□□□□□ -1.33
CPSF4-211ENST00000471455 REG1AP05451 166 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 RAB3BP20337 219 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 TAS2R31P59538 309 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 GNG2P59768 71 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 RPL30P62888 115 aaKnown RBP6.76□□□□□ -1.33
CPSF4-211ENST00000471455 PLA2G7Q13093 441 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 TIMM50Q3ZCQ8 353 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 HACD4Q5VWC8 232 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 SPSB3Q6PJ21 355 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 UNQ9165/PRO28630Q6UXU0 137 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 C19orf35Q6ZS72 473 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 SSX9Q7RTT3 188 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 ZBTB34Q8NCN2 500 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 ZNF502Q8TBZ5 544 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 GATAD1Q8WUU5 269 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 BSCL2Q96G97 398 aaPredicted RBP6.76□□□□□ -1.33
CPSF4-211ENST00000471455 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 UBQLN2Q9UHD9 624 aa6.76□□□□□ -1.33
CPSF4-211ENST00000471455 IGKV1D-8A0A087WSZ0 117 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 MPTX1A8MV57 137 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 NDUFA4O00483 81 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 NQO2P16083 231 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 RPL35AP18077 110 aaKnown RBP6.75□□□□□ -1.33
CPSF4-211ENST00000471455 OR10A3P58181 314 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 OR2B8PP59922 312 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 RBMS2Q15434 407 aaKnown RBP6.75□□□□□ -1.33
CPSF4-211ENST00000471455 ODF3L2Q3SX64 289 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 CDNFQ49AH0 187 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 ZNF367Q7RTV3 350 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 PRSS48Q7RTY5 328 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 SPAG16Q8N0X2 631 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 GDPD1Q8N9F7 314 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 CD300LFQ8TDQ1 290 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 BORCS5Q969J3 196 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 QTRT1Q9BXR0 403 aaKnown RBP6.75□□□□□ -1.33
CPSF4-211ENST00000471455 C11orf68Q9H3H3 251 aaKnown RBP6.75□□□□□ -1.33
CPSF4-211ENST00000471455 DUSP21Q9H596 190 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 MAP6D1Q9H9H5 199 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 ANXA10Q9UJ72 324 aa6.75□□□□□ -1.33
CPSF4-211ENST00000471455 IGKV1D-13A0A0B4J2D9 117 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 IGHV3-35A0A0C4DH35 117 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 A0A1B0GW64 132 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 IGLC7A0M8Q6 106 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 E7EUB6 86 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 K7EMT4 169 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 DEDDO75618 318 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 HPRT1P00492 218 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 IGLV2-14P01704 120 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 IGKV1-13P0DP09 117 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 ERVK-16P61578 105 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 EWSR1Q01844 656 aaKnown RBP eCLIP6.74□□□□□ -1.33
CPSF4-211ENST00000471455 EIF4EBP1Q13541 118 aaPredicted RBP6.74□□□□□ -1.33
CPSF4-211ENST00000471455 TBCEQ15813 527 aaPredicted RBP6.74□□□□□ -1.33
CPSF4-211ENST00000471455 POU2AF1Q16633 256 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 DMBX1Q8NFW5 382 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 OR13F1Q8NGS4 319 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 C11orf45Q8TAV5 145 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 NUDCD2Q8WVJ2 157 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 CMTM3Q96MX0 182 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 C20orf24Q9BUV8 137 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 C21orf62Q9NYP8 219 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 BLOC1S6Q9UL45 172 aa6.74□□□□□ -1.33
CPSF4-211ENST00000471455 FRAS1Q86XX4 4008 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 TRDV1A0A1B0GX56 115 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 TMEM235A6NFC5 223 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 OR2T8A6NH00 312 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 C15orf62A8K5M9 175 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 UPK2O00526 184 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 MRPS14O60783 128 aaKnown RBP6.73□□□□□ -1.33
CPSF4-211ENST00000471455 CD5P06127 495 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 RELQ04864 619 aaPredicted RBP6.73□□□□□ -1.33
CPSF4-211ENST00000471455 CENPSQ8N2Z9 138 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 OR5B3Q8NH48 314 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 C2CD4CQ8TF44 421 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 SECTM1Q8WVN6 248 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 LSM10Q969L4 123 aaKnown RBP6.73□□□□□ -1.33
CPSF4-211ENST00000471455 C20orf173Q96LM9 149 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 RARRES2Q99969 163 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 CSTL1Q9H114 145 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 PLEKHA2Q9HB19 425 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 TMEM140Q9NV12 185 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 NDUFB11Q9NX14 153 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 COMMD9Q9P000 198 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 FBXL17Q9UF56 701 aa6.73□□□□□ -1.33
CPSF4-211ENST00000471455 CGB1A6NKQ9 187 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms