RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 OR4P4Q8NGL7 312 aa14.1□□□□□ -0.15
HSPG2-208ENST00000471322 OR5B3Q8NH48 314 aa14.1□□□□□ -0.15
HSPG2-208ENST00000471322 RPEQ96AT9 228 aa14.1□□□□□ -0.15
HSPG2-208ENST00000471322 MS4A7Q9GZW8 240 aaPredicted RBP14.1□□□□□ -0.15
HSPG2-208ENST00000471322 UNKLQ9H9P5 680 aaKnown RBP14.1□□□□□ -0.15
HSPG2-208ENST00000471322 I3L521 148 aa14.09□□□□□ -0.15
HSPG2-208ENST00000471322 CEACAM3P40198 252 aa14.09□□□□□ -0.15
HSPG2-208ENST00000471322 LRRC75BQ2VPJ9 315 aa14.09□□□□□ -0.15
HSPG2-208ENST00000471322 VMA21Q3ZAQ7 101 aa14.09□□□□□ -0.15
HSPG2-208ENST00000471322 PXDC1Q5TGL8 231 aa14.09□□□□□ -0.15
HSPG2-208ENST00000471322 IL34Q6ZMJ4 242 aa14.09□□□□□ -0.15
HSPG2-208ENST00000471322 TMEM147Q9BVK8 224 aa14.09□□□□□ -0.15
HSPG2-208ENST00000471322 SH3BGRL3Q9H299 93 aa14.09□□□□□ -0.15
HSPG2-208ENST00000471322 LY6LH3BQJ8 138 aa14.08□□□□□ -0.15
HSPG2-208ENST00000471322 IFNA10P01566 189 aa14.08□□□□□ -0.15
HSPG2-208ENST00000471322 PRH1P02810 166 aa14.08□□□□□ -0.15
HSPG2-208ENST00000471322 HTR1DP28221 377 aa14.08□□□□□ -0.15
HSPG2-208ENST00000471322 DVL1P1P54792 670 aaPredicted RBP14.08□□□□□ -0.15
HSPG2-208ENST00000471322 F2RL1P55085 397 aa14.08□□□□□ -0.15
HSPG2-208ENST00000471322 RAB11AP62491 216 aa14.08□□□□□ -0.15
HSPG2-208ENST00000471322 SPINK9Q5DT21 86 aa14.08□□□□□ -0.15
HSPG2-208ENST00000471322 UQCC3Q6UW78 93 aa14.08□□□□□ -0.15
HSPG2-208ENST00000471322 TMEM167AQ8TBQ9 72 aa14.08□□□□□ -0.15
HSPG2-208ENST00000471322 PLA2G2EQ9NZK7 142 aa14.08□□□□□ -0.15
HSPG2-208ENST00000471322 DPM3Q9P2X0 92 aa14.08□□□□□ -0.15
HSPG2-208ENST00000471322 DOCK11Q5JSL3 2073 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 TRAV20A0A0B4J274 112 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 IGHV1-3A0A0C4DH29 117 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 C15orf62A8K5M9 175 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 PMS2P5A8MQ11 134 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 FOXH1O75593 365 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 CAMLGP49069 296 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 PRCDQ00LT1 54 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 DPPA3Q6W0C5 159 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 MOB3BQ86TA1 216 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 RNF5Q99942 180 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 PSMG3Q9BT73 122 aaPredicted RBP14.08□□□□□ -0.16
HSPG2-208ENST00000471322 GGACTQ9BVM4 153 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 PLEKHA3Q9HB20 300 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 UQCC1Q9NVA1 299 aa14.08□□□□□ -0.16
HSPG2-208ENST00000471322 TEX46H3BTG2 121 aa14.07□□□□□ -0.16
HSPG2-208ENST00000471322 CRLF1O75462 422 aa14.07□□□□□ -0.16
HSPG2-208ENST00000471322 AVPP01185 164 aa14.07□□□□□ -0.16
HSPG2-208ENST00000471322 RPL8P62917 257 aaKnown RBP14.07□□□□□ -0.16
HSPG2-208ENST00000471322 TMEM182Q6ZP80 229 aaPredicted RBP14.07□□□□□ -0.16
HSPG2-208ENST00000471322 Q6ZRG5 221 aa14.07□□□□□ -0.16
HSPG2-208ENST00000471322 THNSL2Q86YJ6 484 aa14.07□□□□□ -0.16
HSPG2-208ENST00000471322 COMMD5Q9GZQ3 224 aa14.07□□□□□ -0.16
HSPG2-208ENST00000471322 WDR61Q9GZS3 305 aaKnown RBP14.07□□□□□ -0.16
HSPG2-208ENST00000471322 SIRT7Q9NRC8 400 aa14.07□□□□□ -0.16
HSPG2-208ENST00000471322 IGHV2-70DA0A0C4DH43 119 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 TEX50A0A1B0GTY4 177 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 KRBOX1C9JBD0 128 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 HOXB4P17483 251 aaPredicted RBP14.06□□□□□ -0.16
HSPG2-208ENST00000471322 SERF2P84101 59 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 PAX2Q02962 417 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 VWC2Q2TAL6 325 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 AKR1C8PQ5T2L2 129 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 TPTE2P1Q5T6R2 138 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 BTNL8Q6UX41 500 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 COMMD1Q8N668 190 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 TEX45Q8NA69 505 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 OR1L8Q8NGR8 309 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 LYPD6BQ8NI32 183 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 HRH4Q9H3N8 390 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 TIMM9Q9Y5J7 89 aa14.06□□□□□ -0.16
HSPG2-208ENST00000471322 ODF3BA8MYP8 253 aa14.05□□□□□ -0.16
HSPG2-208ENST00000471322 IGLV2-23P01705 113 aa14.05□□□□□ -0.16
HSPG2-208ENST00000471322 DLX1P56177 255 aa14.05□□□□□ -0.16
HSPG2-208ENST00000471322 PJVKQ0ZLH3 352 aa14.05□□□□□ -0.16
HSPG2-208ENST00000471322 TOR2AQ5JU69 321 aa14.05□□□□□ -0.16
HSPG2-208ENST00000471322 ETV3LQ6ZN32 361 aa14.05□□□□□ -0.16
HSPG2-208ENST00000471322 TAF15Q92804 592 aaKnown RBP eCLIP14.05□□□□□ -0.16
HSPG2-208ENST00000471322 CDC42EP3Q9UKI2 254 aa14.05□□□□□ -0.16
HSPG2-208ENST00000471322 OOSP1A8MZH6 123 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 SLC24A4Q8NFF2 622 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 HINT2Q9BX68 163 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 C7orf69Q9H7B7 122 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 POLR3KQ9Y2Y1 108 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-208ENST00000471322 A0A1W2PN81 502 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 INS-IGF2F8WCM5 200 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 TSPAN15O95858 294 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 IFNA4P05014 189 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 NPY1RP25929 384 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 CHRNA7P36544 502 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 RUNX1Q01196 453 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 ZNF616Q08AN1 781 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 MINOS1Q5TGZ0 78 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 CCDC144NLQ6NUI1 221 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 VMO1Q7Z5L0 202 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 CENPVQ7Z7K6 275 aaPredicted RBP14.04□□□□□ -0.16
HSPG2-208ENST00000471322 FAM213BQ8TBF2 198 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 SIRPDQ9H106 197 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 MINOS1-NBL1R4GNA1 71 aa14.04□□□□□ -0.16
HSPG2-208ENST00000471322 UBE2L5PA0A1B0GUS4 154 aa14.03□□□□□ -0.16
HSPG2-208ENST00000471322 ZP3P21754 424 aa14.03□□□□□ -0.16
HSPG2-208ENST00000471322 CD1BP29016 333 aa14.03□□□□□ -0.16
HSPG2-208ENST00000471322 SRP14P37108 136 aaKnown RBP14.03□□□□□ -0.16
HSPG2-208ENST00000471322 DLK1P80370 383 aa14.03□□□□□ -0.16
HSPG2-208ENST00000471322 PRB3Q04118 309 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms