RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 CSN3P07498 182 aa3.53□□□□□ -1.84
VPS50-210ENST00000471188 IFI6P09912 130 aa3.53□□□□□ -1.84
VPS50-210ENST00000471188 G6PCP35575 357 aa3.53□□□□□ -1.84
VPS50-210ENST00000471188 ATP5G2Q06055 141 aa3.53□□□□□ -1.84
VPS50-210ENST00000471188 SPATA31B1PQ5VZV4 182 aa3.53□□□□□ -1.84
VPS50-210ENST00000471188 ABCA7Q8IZY2 2146 aa3.53□□□□□ -1.84
VPS50-210ENST00000471188 MTURNQ8N3F0 131 aa3.53□□□□□ -1.84
VPS50-210ENST00000471188 SRSF8Q9BRL6 282 aaKnown RBP3.53□□□□□ -1.84
VPS50-210ENST00000471188 HINT2Q9BX68 163 aa3.53□□□□□ -1.84
VPS50-210ENST00000471188 SCRT2Q9NQ03 307 aa3.53□□□□□ -1.84
VPS50-210ENST00000471188 B4GALT7Q9UBV7 327 aa3.53□□□□□ -1.84
VPS50-210ENST00000471188 HSPB8Q9UJY1 196 aa3.53□□□□□ -1.84
VPS50-210ENST00000471188 RALYQ9UKM9 306 aaKnown RBP3.53□□□□□ -1.84
VPS50-210ENST00000471188 TMEM265A0A087WTH1 108 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 VSTM5A8MXK1 200 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.52□□□□□ -1.85
VPS50-210ENST00000471188 RRHO14718 337 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 CD24P25063 80 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 CD1BP29016 333 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 RPS21P63220 83 aaKnown RBP3.52□□□□□ -1.85
VPS50-210ENST00000471188 FOXE3Q13461 319 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 ZNF77Q15935 545 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 ETDBQ3ZM63 59 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 ZNF542PQ5EBM4 170 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 LYSMD4Q5XG99 296 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 ZNF808Q8N4W9 903 aaPredicted RBP3.52□□□□□ -1.85
VPS50-210ENST00000471188 NEU4Q8WWR8 484 aaPredicted RBP3.52□□□□□ -1.85
VPS50-210ENST00000471188 C5orf30Q96GV9 206 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 ZNF479Q96JC4 524 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 OR2V2Q96R30 315 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 TXNDC17Q9BRA2 123 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 RNF208Q9H0X6 261 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 METTL7AQ9H8H3 244 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 ZNF355PQ9NSJ1 428 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 LIN7CQ9NUP9 197 aaKnown RBP3.52□□□□□ -1.85
VPS50-210ENST00000471188 ALKBH4Q9NXW9 302 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 F11RQ9Y624 299 aaKnown RBP3.52□□□□□ -1.85
VPS50-210ENST00000471188 IGKV1-6A0A0C4DH72 117 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 KBTBD11-OT1A0A1B0GTJ5 212 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 A0A1B0GW15 77 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 A0A1W2PRE2 83 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 C5orf49A4QMS7 147 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 LIPT2A6NK58 231 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 CGAP01215 116 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 CCNOP22674 350 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 GATA3P23771 443 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 COL8A2P25067 703 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 GCHFRP30047 84 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 NRN1LQ496H8 165 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 PARM1Q6UWI2 310 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 ACP7Q6ZNF0 438 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 SH2D6Q7Z4S9 175 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 SPEM1Q8N4L4 309 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 LINC00470Q9BZP3 86 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 HES4Q9HCC6 221 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 KLRF1Q9NZS2 232 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 RAXQ9Y2V3 346 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 R4GN57 208 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 SDK2Q58EX2 2172 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 IZUMO1RA6ND01 250 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 CER1O95813 267 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 PATE4P0C8F1 98 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 BCL3P20749 454 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 GCSHP23434 173 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 ZNF137PP52743 207 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 ZNF138P52744 262 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 WFDC2Q14508 124 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 PSG5Q15238 335 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 RTL8BQ17RB0 113 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 FAM69BQ5VUD6 431 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 SLC25A47Q6Q0C1 308 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 SPSB4Q96A44 273 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 C7orf69Q9H7B7 122 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 AKIRIN1Q9H9L7 192 aaPredicted RBP3.52□□□□□ -1.85
VPS50-210ENST00000471188 HEYLQ9NQ87 328 aaPredicted RBP3.52□□□□□ -1.85
VPS50-210ENST00000471188 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.52□□□□□ -1.85
VPS50-210ENST00000471188 RABAC1Q9UI14 185 aa3.52□□□□□ -1.85
VPS50-210ENST00000471188 A0A096LPE4 126 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 IGHV1-24A0A0C4DH33 117 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 A0A1W2PPZ6 126 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 A1L4Q6 167 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 OTOL1A6NHN0 477 aaPredicted RBP3.51□□□□□ -1.85
VPS50-210ENST00000471188 B5MCH6 92 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 C9JCJ5 164 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 FOXH1O75593 365 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 KLF7O75840 302 aaPredicted RBP3.51□□□□□ -1.85
VPS50-210ENST00000471188 CLPSP04118 112 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 SPINK8P0C7L1 97 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 STAG3L2P0CL84 134 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 COX8AP10176 69 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 NMUP48645 174 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 RNPS1Q15287 305 aaKnown RBP3.51□□□□□ -1.85
VPS50-210ENST00000471188 GUSBP1Q15486 140 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 C5orf64Q2M2E5 130 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 TCTEX1D4Q5JR98 221 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 SMIM20Q8N5G0 67 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 OR10D3Q8NH80 312 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 FAM168AQ92567 244 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 FER1L6-AS2Q96M78 137 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 MS4A6AQ9H2W1 248 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms