RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 UBE2KP61086 200 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 FOXE3Q13461 319 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 FHL3Q13643 280 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 HNF4GQ14541 408 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 VMA21Q3ZAQ7 101 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 NMSQ5H8A3 153 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 THOC7Q6I9Y2 204 aaKnown RBP7.07□□□□□ -1.28
SF3A1-206ENST00000471037 GSG1LQ6UXU4 331 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 H2BFWTQ7Z2G1 175 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 Q8N6K4 173 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 DMBX1Q8NFW5 382 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 OR11H7Q8NGC8 314 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 OR8H1Q8NGG4 311 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 OR4A5Q8NH83 315 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 VSTM2AQ8TAG5 236 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 EAF1Q96JC9 268 aaPredicted RBP7.07□□□□□ -1.28
SF3A1-206ENST00000471037 RHOVQ96L33 236 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 PRR25Q96S07 402 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 BET1LQ9NYM9 111 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 ZNF580Q9UK33 172 aa7.07□□□□□ -1.28
SF3A1-206ENST00000471037 A0A1B0GU03 582 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 C13orf42A0A1B0GVH6 325 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 LINC01548A6NM66 108 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 SRRM4A7MD48 611 aaKnown RBP7.06□□□□□ -1.28
SF3A1-206ENST00000471037 FAM25EA8MYX2 175 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 CCSO14618 274 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 OR2A4O95047 310 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 IGLV2-23P01705 113 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 FGF2P09038 288 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 GIPP09681 153 aaPredicted RBP7.06□□□□□ -1.28
SF3A1-206ENST00000471037 SAA1P0DJI8 122 aaPredicted RBP7.06□□□□□ -1.28
SF3A1-206ENST00000471037 CXCL3P19876 107 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 CYCSP99999 105 aaKnown RBP7.06□□□□□ -1.28
SF3A1-206ENST00000471037 CFHR3Q02985 330 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 SMCO1Q147U7 214 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 DEFB136Q30KP8 78 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 CXorf66Q5JRM2 361 aaPredicted RBP7.06□□□□□ -1.28
SF3A1-206ENST00000471037 OR4A47Q6IF82 309 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 SSX9Q7RTT3 188 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 PUSL1Q8N0Z8 303 aaKnown RBP7.06□□□□□ -1.28
SF3A1-206ENST00000471037 NPBQ8NG41 125 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 C4orf3Q8WVX3 66 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 GPR146Q96CH1 333 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 C2orf50Q96LR7 162 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 OR2A7Q96R45 310 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 PDCD10Q9BUL8 212 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 ZNF436Q9C0F3 470 aaPredicted RBP7.06□□□□□ -1.28
SF3A1-206ENST00000471037 TMEM140Q9NV12 185 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 COA4Q9NYJ1 87 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 KIAA1456Q9P272 454 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 CACFD1Q9UGQ2 172 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 ZNF256Q9Y2P7 627 aaPredicted RBP7.06□□□□□ -1.28
SF3A1-206ENST00000471037 HUWE1Q7Z6Z7 4374 aaKnown RBP7.06□□□□□ -1.28
SF3A1-206ENST00000471037 RYR2Q92736 4967 aa7.06□□□□□ -1.28
SF3A1-206ENST00000471037 A0A0G2JRQ6 117 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 SEC14L6B5MCN3 397 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 RRHO14718 337 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 NBR2O15453 112 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 SLC25A17O43808 307 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 SNAPC5O75971 98 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 NDUFA3O95167 84 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 IGHG4P01861 327 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 IL6RP08887 468 aaPredicted RBP7.05□□□□□ -1.28
SF3A1-206ENST00000471037 INSL3P51460 131 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 H2BFSP57053 126 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 RAP2BP61225 183 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 PSG5Q15238 335 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 MMDQ15546 238 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 IAH1Q2TAA2 248 aaPredicted RBP7.05□□□□□ -1.28
SF3A1-206ENST00000471037 CASC10Q5T4H9 136 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 LCNL1Q6ZST4 164 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 AKAP14Q86UN6 197 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 VKORC1L1Q8N0U8 176 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 Q8N9W7 124 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 TEX45Q8NA69 505 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 ZBTB8BQ8NAP8 495 aaPredicted RBP7.05□□□□□ -1.28
SF3A1-206ENST00000471037 MUC7Q8TAX7 377 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 TMEM167AQ8TBQ9 72 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 MYOZ3Q8TDC0 251 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 NMES1Q9C002 83 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.05□□□□□ -1.28
SF3A1-206ENST00000471037 CACNG5Q9UF02 275 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 PRNDQ9UKY0 176 aa7.05□□□□□ -1.28
SF3A1-206ENST00000471037 C15orf61A6NNL5 157 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 NCBP2LA6PVI3 153 aaKnown RBP7.04□□□□□ -1.28
SF3A1-206ENST00000471037 MPTX1A8MV57 137 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 FAM90A26D6RGX4 464 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 UPK2O00526 184 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 PITX3O75364 302 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 KBTBD11O94819 623 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 SIX6O95475 246 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 IGF1P05019 195 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 CRYGBP07316 175 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 OR9G9P0C7N8 305 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 PSMB8P28062 276 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 C5orf64Q2M2E5 130 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 AARDQ4LEZ3 155 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 ZNF429Q86V71 674 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 MMD2Q8IY49 270 aa7.04□□□□□ -1.28
SF3A1-206ENST00000471037 FAM71E2Q8N5Q1 922 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms