RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 RNF126Q9BV68 326 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 TMUB1Q9BVT8 246 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 TPSG1Q9NRR2 321 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 TNFRSF19Q9NS68 423 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 LYRM2Q9NU23 88 aaPredicted RBP7.79□□□□□ -1.16
CCM2-204ENST00000470837 TNFSF18Q9UNG2 199 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 HSPB11Q9Y547 144 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 SOX21Q9Y651 276 aaPredicted RBP7.79□□□□□ -1.16
CCM2-204ENST00000470837 U3KQ87 197 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 ITPR3Q14573 2671 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 ABCA2Q9BZC7 2435 aa7.79□□□□□ -1.16
CCM2-204ENST00000470837 A6NDX4 124 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 H0YIZ8 118 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 H3BP45 60 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 TSPAN9O75954 239 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 IGHV4-59P01825 116 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 HLA-DRB1P01911 266 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 IFNA4P05014 189 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 HTR2BP41595 481 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 PJVKQ0ZLH3 352 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 ZNF345Q14585 488 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 ARSJQ5FYB0 599 aaPredicted RBP7.78□□□□□ -1.16
CCM2-204ENST00000470837 C9orf152Q5JTZ5 239 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 Q8N9W7 124 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 SLC24A4Q8NFF2 622 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 ZNF418Q8TF45 676 aaPredicted RBP7.78□□□□□ -1.16
CCM2-204ENST00000470837 SRSF12Q8WXF0 261 aaKnown RBP7.78□□□□□ -1.16
CCM2-204ENST00000470837 AQP10Q96PS8 301 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 SRSF8Q9BRL6 282 aaKnown RBP7.78□□□□□ -1.16
CCM2-204ENST00000470837 ARL6Q9H0F7 186 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 NDUFA4L2Q9NRX3 87 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 PLSCR3Q9NRY6 295 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 VPREB3Q9UKI3 123 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 NBPF19A0A087WUL8 3843 aa7.78□□□□□ -1.16
CCM2-204ENST00000470837 FAM24AA6NFZ4 105 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 MSGN1A6NI15 193 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 G3V3Q6 166 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 FCN1O00602 326 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 TAAR5O14804 337 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 HOXA3O43365 443 aaPredicted RBP7.77□□□□□ -1.17
CCM2-204ENST00000470837 KCNAB3O43448 404 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 OR13C7P0DN81 318 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 DEFA4P12838 97 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 NPY1RP25929 384 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 S100A11P31949 105 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 SULT1A1P50225 295 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 EIF5AP63241 154 aaKnown RBP7.77□□□□□ -1.17
CCM2-204ENST00000470837 CX3CL1P78423 397 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 TMEM267Q0VDI3 215 aaPredicted RBP7.77□□□□□ -1.17
CCM2-204ENST00000470837 C10orf55Q5SWW7 151 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 SLC25A24Q6NUK1 477 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 LILRB2Q8N423 598 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 TMEM86BQ8N661 226 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 TMEM252Q8N6L7 170 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 SIGLECL1Q8N7X8 197 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 C5orf56Q8N8D9 126 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 OR10P1Q8NGE3 313 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 OR1S2Q8NGQ3 325 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 OR1L6Q8NGR2 347 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 PIFOQ8TCI5 191 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 PINX1Q96BK5 328 aaKnown RBP7.77□□□□□ -1.17
CCM2-204ENST00000470837 SMR3AQ99954 134 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 PARP11Q9NR21 331 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 CR1P17927 2039 aa7.77□□□□□ -1.17
CCM2-204ENST00000470837 ABCA1O95477 2261 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 FLNAP21333 2647 aaKnown RBP7.76□□□□□ -1.17
CCM2-204ENST00000470837 BORCS7-ASMTA0A0B4J1R7 106 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 CST7O76096 145 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 METTL15P1P0C7V9 234 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 HKR1P10072 659 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 MYOD1P15172 320 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 VDAC2P45880 294 aaPredicted RBP7.76□□□□□ -1.17
CCM2-204ENST00000470837 EWSR1Q01844 656 aaKnown RBP eCLIP7.76□□□□□ -1.17
CCM2-204ENST00000470837 OR8G2PQ6IF36 304 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 TMUB2Q71RG4 321 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 C9orf62Q8N4C0 152 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 KCNRGQ8N5I3 272 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 TMEM217Q8N7C4 229 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 TMEM68Q96MH6 324 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 JMJD8Q96S16 334 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 ARPC5LQ9BPX5 153 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 NPFFR1Q9GZQ6 430 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 PRDM13Q9H4Q3 707 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 MYO9AB2RTY4 2548 aa7.76□□□□□ -1.17
CCM2-204ENST00000470837 IGHV7-81A0A0B4J1V7 117 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 IGSF23A1L1A6 192 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 INS-IGF2F8WCM5 200 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 TRIM77I1YAP6 450 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 BCL2L11O43521 198 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 DFFBO76075 338 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 TMEM50AO95807 157 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 IFNA5P01569 189 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 CRYBA1P05813 215 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 CXCL2P19875 107 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 PAX9P55771 341 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 ZNF266Q14584 549 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 LGALSLQ3ZCW2 172 aaPredicted RBP7.75□□□□□ -1.17
CCM2-204ENST00000470837 ETV3LQ6ZN32 361 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 SLC35E3Q7Z769 313 aa7.75□□□□□ -1.17
CCM2-204ENST00000470837 OR10W1Q8NGF6 305 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms