RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 PRSS29PA6NIE9 313 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 FGF2P09038 288 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 P0DMU3 169 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 FAM231AP0DMU4 169 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 FAM231CP0DMU5 169 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 AREGP15514 252 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 FCGR2BP31994 310 aaPredicted RBP6.48□□□□□ -1.37
XRN1-208ENST00000470537 RELQ04864 619 aaPredicted RBP6.48□□□□□ -1.37
XRN1-208ENST00000470537 SPHARQ15513 63 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 SOHLH1Q5JUK2 328 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 ZNF66Q6ZN08 573 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 AHSA2Q719I0 299 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 C8orf59Q8N0T1 100 aaPredicted RBP6.48□□□□□ -1.37
XRN1-208ENST00000470537 VKORC1L1Q8N0U8 176 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 PUSL1Q8N0Z8 303 aaKnown RBP6.48□□□□□ -1.37
XRN1-208ENST00000470537 OR10R2Q8NGX6 335 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 TCTEX1D2Q8WW35 142 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 UFD1Q92890 307 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 C20orf24Q9BUV8 137 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 CCDC90BQ9GZT6 254 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 KCNK15Q9H427 330 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 HRASLSQ9HDD0 168 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 BET1LQ9NYM9 111 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 V9GY05 133 aa6.48□□□□□ -1.37
XRN1-208ENST00000470537 DNAH10Q8IVF4 4471 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 TRAV10A0A0B4J240 114 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 IGHV3-35A0A0C4DH35 117 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 MFSD2BA6NFX1 497 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 DFFBO76075 338 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 HLA-DQB1P01920 261 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 CTSDP07339 412 aaPredicted RBP6.47□□□□□ -1.37
XRN1-208ENST00000470537 DTYMKP23919 212 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 ARPC4P59998 168 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 INSL4Q14641 139 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 OR2B11Q5JQS5 317 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 PVRIGQ6DKI7 326 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 SSX9Q7RTT3 188 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 APRG1Q8IVJ8 170 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 ANAPC16Q96DE5 110 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 C5orf30Q96GV9 206 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 RNF126Q9BV68 326 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 DCSTAMPQ9H295 470 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 S100A14Q9HCY8 104 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 PRR13Q9NZ81 148 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 SPATA2Q9UM82 520 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 KCNK7Q9Y2U2 307 aa6.47□□□□□ -1.37
XRN1-208ENST00000470537 AK6Q9Y3D8 172 aaKnown RBP6.47□□□□□ -1.37
XRN1-208ENST00000470537 A0A075B6Q4 140 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 OR2T8A6NH00 312 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 C15orf61A6NNL5 157 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 E7EUB6 86 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 J3QRK9 145 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 PDCD5O14737 125 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 NUPL2O15504 423 aaKnown RBP6.46□□□□□ -1.38
XRN1-208ENST00000470537 CA1P00915 261 aaPredicted RBP6.46□□□□□ -1.38
XRN1-208ENST00000470537 REG1AP05451 166 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 EIF4EP06730 217 aaKnown RBP6.46□□□□□ -1.38
XRN1-208ENST00000470537 MIFP14174 115 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 RPA2P15927 270 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 HIST1H1DP16402 221 aaKnown RBP6.46□□□□□ -1.38
XRN1-208ENST00000470537 GNB3P16520 340 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 TAS2R31P59538 309 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 SLC25A24Q6NUK1 477 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 CNIH2Q6PI25 160 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 PACRGLQ8N7B6 248 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 POM121L12Q8N7R1 296 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 TMEM116Q8NCL8 245 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 ZBTB34Q8NCN2 500 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 BPIFB6Q8NFQ5 453 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 QTRT1Q9BXR0 403 aaKnown RBP6.46□□□□□ -1.38
XRN1-208ENST00000470537 SCN3BQ9NY72 215 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 C21orf62Q9NYP8 219 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 SMPXQ9UHP9 88 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 ETV7Q9Y603 341 aa6.46□□□□□ -1.38
XRN1-208ENST00000470537 IGHV4-4A0A075B6R2 117 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 TRAV14DV4A0A0A6YYC5 116 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 A0A1B0GVY2 172 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 DNASE2O00115 360 aaPredicted RBP6.45□□□□□ -1.38
XRN1-208ENST00000470537 MFNGO00587 321 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 RBFOX2O43251 390 aaKnown RBP eCLIP6.45□□□□□ -1.38
XRN1-208ENST00000470537 SCGNO76038 276 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 HPRT1P00492 218 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 SERPINE2P07093 398 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 TRAPPC2P0DI81 140 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 TRAPPC2BP0DI82 140 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 NQO2P16083 231 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 NFYAP23511 347 aaPredicted RBP6.45□□□□□ -1.38
XRN1-208ENST00000470537 NPY1RP25929 384 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 CALRP27797 417 aaKnown RBP6.45□□□□□ -1.38
XRN1-208ENST00000470537 CLDN12P56749 244 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 OR2B8PP59922 312 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 RPL30P62888 115 aaKnown RBP6.45□□□□□ -1.38
XRN1-208ENST00000470537 PLA2G7Q13093 441 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 CATR1Q13166 79 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 RCN1Q15293 331 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 MSMO1Q15800 293 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 STHQ8IWL8 128 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 GDPD1Q8N9F7 314 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 MAFIPQ8WZ33 124 aa6.45□□□□□ -1.38
XRN1-208ENST00000470537 BORCS5Q969J3 196 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms