RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 BCL2L11O43521 198 aa12.06□□□□□ -0.48
COL4A5-203ENST00000470339 HOXA1P49639 335 aaPredicted RBP12.06□□□□□ -0.48
COL4A5-203ENST00000470339 SULT1A1P50225 295 aa12.06□□□□□ -0.48
COL4A5-203ENST00000470339 EWSR1Q01844 656 aaKnown RBP eCLIP12.06□□□□□ -0.48
COL4A5-203ENST00000470339 SPANXN5Q5MJ07 72 aa12.06□□□□□ -0.48
COL4A5-203ENST00000470339 HSD17B13Q7Z5P4 300 aaPredicted RBP12.06□□□□□ -0.48
COL4A5-203ENST00000470339 STPG2Q8N412 459 aa12.06□□□□□ -0.48
COL4A5-203ENST00000470339 RBM14Q96PK6 669 aaKnown RBP12.06□□□□□ -0.48
COL4A5-203ENST00000470339 PRDM13Q9H4Q3 707 aa12.06□□□□□ -0.48
COL4A5-203ENST00000470339 PITPNC1Q9UKF7 332 aa12.06□□□□□ -0.48
COL4A5-203ENST00000470339 NCBP2LA6PVI3 153 aaKnown RBP12.05□□□□□ -0.48
COL4A5-203ENST00000470339 FGF16O43320 207 aa12.05□□□□□ -0.48
COL4A5-203ENST00000470339 MYOD1P15172 320 aa12.05□□□□□ -0.48
COL4A5-203ENST00000470339 RPL27AP46776 148 aaKnown RBP12.05□□□□□ -0.48
COL4A5-203ENST00000470339 ERHP84090 104 aaKnown RBP12.05□□□□□ -0.48
COL4A5-203ENST00000470339 TNXAQ16473 311 aa12.05□□□□□ -0.48
COL4A5-203ENST00000470339 FBLN7Q53RD9 439 aa12.05□□□□□ -0.48
COL4A5-203ENST00000470339 ZNF562Q6V9R5 426 aa12.05□□□□□ -0.48
COL4A5-203ENST00000470339 C16orf82Q7Z2V1 217 aa12.05□□□□□ -0.48
COL4A5-203ENST00000470339 SLC51BQ86UW2 128 aa12.05□□□□□ -0.48
COL4A5-203ENST00000470339 Q8N9W7 124 aa12.05□□□□□ -0.48
COL4A5-203ENST00000470339 HINT2Q9BX68 163 aa12.05□□□□□ -0.48
COL4A5-203ENST00000470339 OTOGQ6ZRI0 2925 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 MXRA5Q9NR99 2828 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 A6NDX4 124 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 CGB1A6NKQ9 187 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 H3BP45 60 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 FCN1O00602 326 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 HTR2BP41595 481 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 HBG1P69891 147 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 HBG2P69892 147 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 NHLH2Q02577 135 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 DEFB112Q30KQ8 113 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 BSXQ3C1V8 233 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 SPINK9Q5DT21 86 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 SPNS3Q6ZMD2 512 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 RASL11BQ9BPW5 248 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 SLA2Q9H6Q3 261 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 TMEM160Q9NX00 188 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 NAV3Q8IVL0 2385 aa12.04□□□□□ -0.48
COL4A5-203ENST00000470339 C15orf62A8K5M9 175 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 E7EUB6 86 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 H3BUX3 64 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 M0QZK8 103 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 CNIH1O95406 144 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 CA2P00918 260 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 IFNA10P01566 189 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 HLA-DRB1P01911 266 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 OPN1MWP04001 364 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 OPN1MW2P0DN77 364 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 OPN1MW3P0DN78 364 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 RAB11AP62491 216 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 EIF5AP63241 154 aaKnown RBP12.03□□□□□ -0.48
COL4A5-203ENST00000470339 SSBP2P81877 361 aaPredicted RBP12.03□□□□□ -0.48
COL4A5-203ENST00000470339 TUSC1Q2TAM9 212 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 BCL6BQ8N143 479 aaPredicted RBP12.03□□□□□ -0.48
COL4A5-203ENST00000470339 OR1S2Q8NGQ3 325 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 OR5R1Q8NH85 324 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 OR4C12Q96R67 309 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 SLC25A33Q9BSK2 321 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 FBXL17Q9UF56 701 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 MOB4Q9Y3A3 225 aa12.03□□□□□ -0.48
COL4A5-203ENST00000470339 SOX21Q9Y651 276 aaPredicted RBP12.03□□□□□ -0.48
COL4A5-203ENST00000470339 ZNF469Q96JG9 3925 aaPredicted RBP12.03□□□□□ -0.48
COL4A5-203ENST00000470339 A0A1B0GW64 132 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 PMS2P5A8MQ11 134 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 DFFBO76075 338 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 JTBO76095 146 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 CST7O76096 145 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 METTL15P1P0C7V9 234 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 FOSL1P15407 271 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 HNF1AP20823 631 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 NPY1RP25929 384 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 SNCAP37840 140 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 IER3P46695 156 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 SUB1P53999 127 aaKnown RBP eCLIP12.02□□□□□ -0.49
COL4A5-203ENST00000470339 ATP6V1FQ16864 119 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 C2orf83Q53S99 150 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 Q6YL49 198 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 SLC24A4Q8NFF2 622 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 OR10W1Q8NGF6 305 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 STOML3Q8TAV4 291 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 SRSF12Q8WXF0 261 aaKnown RBP12.02□□□□□ -0.49
COL4A5-203ENST00000470339 PINX1Q96BK5 328 aaKnown RBP12.02□□□□□ -0.49
COL4A5-203ENST00000470339 CYTL1Q9NRR1 136 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 TLN2Q9Y4G6 2542 aa12.02□□□□□ -0.49
COL4A5-203ENST00000470339 BORCS7-ASMTA0A0B4J1R7 106 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 IGLC7A0M8Q6 106 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 TEX22C9J3V5 150 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 OR8U8P0C7N1 319 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 GNB1P62873 340 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 UBA52P62987 128 aaKnown RBP12.01□□□□□ -0.49
COL4A5-203ENST00000470339 CX3CL1P78423 397 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 WT1-ASQ06250 92 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 TMEM267Q0VDI3 215 aaPredicted RBP12.01□□□□□ -0.49
COL4A5-203ENST00000470339 FXYD3Q14802 87 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 C10orf55Q5SWW7 151 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 C5orf56Q8N8D9 126 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 UBAC2Q8NBM4 344 aa12.01□□□□□ -0.49
COL4A5-203ENST00000470339 ZNF114Q8NC26 417 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms