RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 SMAGPQ0VAQ4 97 aa12.67□□□□□ -0.38
LIMS2-213ENST00000469300 JMJD8Q96S16 334 aa12.67□□□□□ -0.38
LIMS2-213ENST00000469300 PSMG3Q9BT73 122 aaPredicted RBP12.67□□□□□ -0.38
LIMS2-213ENST00000469300 HSPB8Q9UJY1 196 aa12.67□□□□□ -0.38
LIMS2-213ENST00000469300 C5orf52A6NGY3 159 aa12.67□□□□□ -0.38
LIMS2-213ENST00000469300 MIC13Q5XKP0 118 aa12.67□□□□□ -0.38
LIMS2-213ENST00000469300 NDUFS8O00217 210 aa12.66□□□□□ -0.38
LIMS2-213ENST00000469300 MOSP00540 346 aa12.66□□□□□ -0.38
LIMS2-213ENST00000469300 CD8AP01732 235 aa12.66□□□□□ -0.38
LIMS2-213ENST00000469300 MDKP21741 143 aaPredicted RBP12.66□□□□□ -0.38
LIMS2-213ENST00000469300 MEF2BQ02080 365 aaPredicted RBP12.66□□□□□ -0.38
LIMS2-213ENST00000469300 IER3P46695 156 aa12.66□□□□□ -0.38
LIMS2-213ENST00000469300 B3GALT5-AS1P59052 145 aa12.66□□□□□ -0.38
LIMS2-213ENST00000469300 IGHV1-46P01743 117 aa12.66□□□□□ -0.38
LIMS2-213ENST00000469300 HSPB1P04792 205 aaKnown RBP12.66□□□□□ -0.38
LIMS2-213ENST00000469300 CA7P43166 264 aa12.66□□□□□ -0.38
LIMS2-213ENST00000469300 LURAP1LQ8IV03 231 aa12.66□□□□□ -0.38
LIMS2-213ENST00000469300 LY6G6EA0A0G2JKS1 128 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 MT-ND6P03923 174 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 FCGR2BP31994 310 aaPredicted RBP12.65□□□□□ -0.38
LIMS2-213ENST00000469300 GPHA2Q96T91 129 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 U3KQA8 63 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 SRRM5B3KS81 715 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 RBFOX2O43251 390 aaKnown RBP eCLIP12.65□□□□□ -0.38
LIMS2-213ENST00000469300 IGFL3Q6UXB1 125 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 SGMS2Q8NHU3 365 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 TMEM133Q9H2Q1 129 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 COL4A6Q14031 1691 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 MAS1LP35410 378 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 EFNA4P52798 201 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 SOD3P08294 240 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 ZNF497Q6ZNH5 498 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 CACNG8Q8WXS5 425 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 NPIPB3Q92617 1050 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 SPSB4Q96A44 273 aa12.65□□□□□ -0.38
LIMS2-213ENST00000469300 CARHSP1Q9Y2V2 147 aaKnown RBP12.65□□□□□ -0.38
LIMS2-213ENST00000469300 TRGC1P0CF51 173 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 TSPOP30536 169 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 SOSTQ9BQB4 213 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 PGPA6NDG6 321 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 H2BFSP57053 126 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 FGFBP3Q8TAT2 258 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 PLPPR1Q8TBJ4 325 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 ZNF319Q9P2F9 582 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 IL36RNQ9UBH0 155 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 SMAD7O15105 426 aaKnown RBP12.64□□□□□ -0.39
LIMS2-213ENST00000469300 PRSS1P07477 247 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 SRSF7Q16629 238 aaKnown RBP eCLIP12.64□□□□□ -0.39
LIMS2-213ENST00000469300 NUP37Q8NFH4 326 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 FBXL15Q9H469 300 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 DIDO1Q9BTC0 2240 aaKnown RBP12.64□□□□□ -0.39
LIMS2-213ENST00000469300 IGKV1D-33P01593 117 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 IGKV1-33P01594 117 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 FREM3P0C091 2139 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 TCL1AP56279 114 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 SPANXN1Q5VSR9 72 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 PRNTQ86SH4 94 aa12.64□□□□□ -0.39
LIMS2-213ENST00000469300 TRGV3P03979 118 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 ETV2O00321 342 aaPredicted RBP12.63□□□□□ -0.39
LIMS2-213ENST00000469300 PSMB2P49721 201 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 RPS20P60866 119 aaKnown RBP12.63□□□□□ -0.39
LIMS2-213ENST00000469300 NPFFR1Q9GZQ6 430 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 IFI27L2Q9H2X8 130 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 PRR32B1ATL7 298 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 CA2P00918 260 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 HERPUD1Q15011 391 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 WDFY1Q8IWB7 410 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 VKORC1L1Q8N0U8 176 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 RNASEH2CQ8TDP1 164 aaKnown RBP12.63□□□□□ -0.39
LIMS2-213ENST00000469300 DDB2Q92466 427 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 SLC25A28Q96A46 364 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 NABP2Q9BQ15 211 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 NDUFAF3Q9BU61 184 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 TSC2P49815 1807 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 FOXG1P55316 489 aaPredicted RBP12.63□□□□□ -0.39
LIMS2-213ENST00000469300 MRPL54Q6P161 138 aaKnown RBP12.63□□□□□ -0.39
LIMS2-213ENST00000469300 RAX2Q96IS3 184 aa12.63□□□□□ -0.39
LIMS2-213ENST00000469300 IGHV3OR16-10A0A075B7F0 116 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 C17orf98A8MV24 154 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 CSN3P07498 182 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 MRPL20Q9BYC9 149 aaKnown RBP12.62□□□□□ -0.39
LIMS2-213ENST00000469300 PTPRDP23468 1912 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 A0A0G2JNJ9 132 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 HTN1P15515 57 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 ZNF137PP52743 207 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 ZNF672Q499Z4 452 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-213ENST00000469300 PIP4P1Q86T03 277 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 PPP1R27Q86WC6 154 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 TMEM183AQ8IXX5 376 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 OR4X2Q8NGF9 303 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 Q9UFV3 132 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 TMEM189A5PLL7 270 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 Q5PR19 223 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 FOXL2NBQ6ZUU3 175 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 ARPC1AQ92747 370 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 SLC25A33Q9BSK2 321 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 J3KRW8 73 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 APCSP02743 223 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 TCTAP57738 103 aa12.62□□□□□ -0.39
LIMS2-213ENST00000469300 SYT8Q8NBV8 401 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms