RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 POLR3KQ9Y2Y1 108 aaPredicted RBP7.55□□□□□ -1.2
SMC1A-205ENST00000469129 TRAV1-1A0A0B4J248 108 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 A0A1B0GW64 132 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 PRSS46E5RG02 174 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 SLC25A17O43808 307 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 ACTL6BO94805 426 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 CA2P00918 260 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 IFNA1P01562 189 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 HOXB4P17483 251 aaPredicted RBP7.54□□□□□ -1.2
SMC1A-205ENST00000469129 COL8A1P27658 744 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 ATP5J2P56134 94 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 LGALS4P56470 323 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 RAB31Q13636 194 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 BSXQ3C1V8 233 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 BPIFCQ8NFQ6 507 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 SIRPDQ9H106 197 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 ZNF430Q9H8G1 570 aaPredicted RBP7.54□□□□□ -1.2
SMC1A-205ENST00000469129 LPAR2Q9HBW0 351 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 NDUFA4L2Q9NRX3 87 aa7.54□□□□□ -1.2
SMC1A-205ENST00000469129 UTP20O75691 2785 aaKnown RBP7.53□□□□□ -1.2
SMC1A-205ENST00000469129 NBPF19A0A087WUL8 3843 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 TMEM218A2RU14 115 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 RNASEK-C17orf49H0YIS7 233 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 RRHO14718 337 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 TOX4O94842 621 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 VENTXO95231 258 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 PAX1P15863 534 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 MDKP21741 143 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-205ENST00000469129 RPL27AP46776 148 aaKnown RBP7.53□□□□□ -1.2
SMC1A-205ENST00000469129 FHITP49789 147 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 ELLP55199 621 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-205ENST00000469129 LMO4P61968 165 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 LCN2P80188 198 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 PAX2Q02962 417 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 AKR1C1Q04828 323 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 KLRD1Q13241 179 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 HABP2Q14520 560 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-205ENST00000469129 PSG5Q15238 335 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 PRSS8Q16651 343 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 GUK1Q16774 197 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 ACOT6Q3I5F7 207 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-205ENST00000469129 C10orf105Q8TEF2 133 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 SEC11CQ9BY50 192 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 NPVFQ9HCQ7 196 aa7.53□□□□□ -1.2
SMC1A-205ENST00000469129 METTL1Q9UBP6 276 aaKnown RBP7.53□□□□□ -1.2
SMC1A-205ENST00000469129 ADGRG4Q8IZF6 3080 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 ARHGAP32A7KAX9 2087 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 IGHV3-72A0A0B4J1Y9 119 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 CTXND1A0A1B0GTU2 59 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 MAP1LC3B2A6NCE7 125 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 CYSRT1A8MQ03 144 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 VWC2LB2RUY7 222 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 F8W036 122 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 CORTO00230 105 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 TIMM23O14925 209 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 AGPAT2O15120 278 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 APOC3P02656 99 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 CD5P06127 495 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 RNASE2P10153 161 aaKnown RBP7.52□□□□□ -1.21
SMC1A-205ENST00000469129 M6PRP20645 277 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 ZFP36P26651 326 aaKnown RBP7.52□□□□□ -1.21
SMC1A-205ENST00000469129 TAGLN2P37802 199 aaKnown RBP7.52□□□□□ -1.21
SMC1A-205ENST00000469129 OPRK1P41145 380 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 COMPP49747 757 aaPredicted RBP7.52□□□□□ -1.21
SMC1A-205ENST00000469129 UBE2E1P51965 193 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 PLGLAQ15195 96 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 TNXAQ16473 311 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 FFAR4Q5NUL3 377 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 ZNF787Q6DD87 383 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 HCP5Q6MZN7 132 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 TEPPQ6URK8 271 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 TREML4Q6UXN2 200 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 PPP1R27Q86WC6 154 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 SVBPQ8N300 66 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 ZNF114Q8NC26 417 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 OR2T10Q8NGZ9 312 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 RNASEH2CQ8TDP1 164 aaKnown RBP7.52□□□□□ -1.21
SMC1A-205ENST00000469129 SFT2D1Q8WV19 159 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 TMEM170AQ8WVE7 144 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 MBD3L1Q8WWY6 194 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 CFHR4Q92496 578 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 RCC1LQ96I51 464 aaKnown RBP7.52□□□□□ -1.21
SMC1A-205ENST00000469129 SLC35E1Q96K37 410 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 SRSF8Q9BRL6 282 aaKnown RBP7.52□□□□□ -1.21
SMC1A-205ENST00000469129 ACTR3CQ9C0K3 210 aaPredicted RBP7.52□□□□□ -1.21
SMC1A-205ENST00000469129 MAP1LC3BQ9GZQ8 125 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 EIF5A2Q9GZV4 153 aaKnown RBP7.52□□□□□ -1.21
SMC1A-205ENST00000469129 RPRMQ9NS64 109 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 CARHSP1Q9Y2V2 147 aaKnown RBP7.52□□□□□ -1.21
SMC1A-205ENST00000469129 SIGLEC9Q9Y336 463 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 TNCP24821 2201 aa7.52□□□□□ -1.21
SMC1A-205ENST00000469129 NBR2O15453 112 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 CYB5BO43169 146 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 SNAPINO95295 136 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 MOSP00540 346 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 OPN1MWP04001 364 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 CRYGBP07316 175 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 SFTA3P0C7M3 94 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 OPN1MW2P0DN77 364 aa7.51□□□□□ -1.21
SMC1A-205ENST00000469129 OPN1MW3P0DN78 364 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms