RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 FXYD6Q9H0Q3 95 aa16.42■□□□□ 0.22
TTC28-204ENST00000468807 SRD5A3Q9H8P0 318 aa16.42■□□□□ 0.22
TTC28-204ENST00000468807 TENM2Q9NT68 2774 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 IGHV3-35A0A0C4DH35 117 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 SMIM31A0A1B0GVY4 71 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 TMEM213A2RRL7 107 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 OR11H12B2RN74 326 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 KRASP01116 189 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 TRAPPC2P0DI81 140 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 TRAPPC2BP0DI82 140 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 OR13C7P0DN81 318 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 TSPAN5P62079 268 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 KLK9Q2XQG4 91 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 UXS1Q8NBZ7 420 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 FCAMRQ8WWV6 532 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 DGCR14Q96DF8 476 aaKnown RBP16.41■□□□□ 0.22
TTC28-204ENST00000468807 SRSF8Q9BRL6 282 aaKnown RBP16.41■□□□□ 0.22
TTC28-204ENST00000468807 KLK9Q9UKQ9 250 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 NSG2Q9Y328 171 aa16.41■□□□□ 0.22
TTC28-204ENST00000468807 TEX50A0A1B0GTY4 177 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 GPR31O00270 319 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 NAT1P18440 290 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 G6PCP35575 357 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 VBP1P61758 197 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 PHLDA2Q53GA4 152 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 TM4SF20Q53R12 229 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 SLC25A24Q6NUK1 477 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 PLET1Q6UQ28 207 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 BTNL8Q6UX41 500 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 UNQ9165/PRO28630Q6UXU0 137 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 SNX29P2Q8IUI4 249 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 TMEM61Q8N0U2 210 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 GDPD1Q8N9F7 314 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 OR1L8Q8NGR8 309 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 FAM110AQ9BQ89 295 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 FUNDC2Q9BWH2 189 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 MLXQ9UH92 298 aa16.4■□□□□ 0.22
TTC28-204ENST00000468807 A8MWP6 167 aa16.39■□□□□ 0.21
TTC28-204ENST00000468807 SNAPC5O75971 98 aa16.39■□□□□ 0.21
TTC28-204ENST00000468807 SCAF4O95104 1147 aaKnown RBP16.39■□□□□ 0.21
TTC28-204ENST00000468807 WT1-ASQ06250 92 aa16.39■□□□□ 0.21
TTC28-204ENST00000468807 THOC7Q6I9Y2 204 aaKnown RBP16.39■□□□□ 0.21
TTC28-204ENST00000468807 SLC16A13Q7RTY0 426 aa16.39■□□□□ 0.21
TTC28-204ENST00000468807 LYSMD2Q8IV50 215 aa16.39■□□□□ 0.21
TTC28-204ENST00000468807 ZNF502Q8TBZ5 544 aa16.39■□□□□ 0.21
TTC28-204ENST00000468807 OR51B2Q9Y5P1 312 aa16.39■□□□□ 0.21
TTC28-204ENST00000468807 IGHV3-21A0A0B4J1V1 117 aa16.38■□□□□ 0.21
TTC28-204ENST00000468807 RBMY1BA6NDE4 496 aaKnown RBP16.38■□□□□ 0.21
TTC28-204ENST00000468807 RBMY1EA6NEQ0 496 aaKnown RBP16.38■□□□□ 0.21
TTC28-204ENST00000468807 SERPINE2P07093 398 aa16.38■□□□□ 0.21
TTC28-204ENST00000468807 FGF2P09038 288 aa16.38■□□□□ 0.21
TTC28-204ENST00000468807 RBMY1DP0C7P1 496 aaKnown RBP16.38■□□□□ 0.21
TTC28-204ENST00000468807 PTBP1P26599 531 aaKnown RBP eCLIP16.38■□□□□ 0.21
TTC28-204ENST00000468807 S100GP29377 79 aa16.38■□□□□ 0.21
TTC28-204ENST00000468807 ZNF585BQ52M93 769 aa16.38■□□□□ 0.21
TTC28-204ENST00000468807 HSD17B13Q7Z5P4 300 aaPredicted RBP16.38■□□□□ 0.21
TTC28-204ENST00000468807 OR52B4Q8NGK2 314 aa16.38■□□□□ 0.21
TTC28-204ENST00000468807 LSM10Q969L4 123 aaKnown RBP16.38■□□□□ 0.21
TTC28-204ENST00000468807 GAR1Q9NY12 217 aaKnown RBP16.38■□□□□ 0.21
TTC28-204ENST00000468807 OR2T8A6NH00 312 aa16.37■□□□□ 0.21
TTC28-204ENST00000468807 APOA1P02647 267 aa16.37■□□□□ 0.21
TTC28-204ENST00000468807 LINC00322Q6ZN03 302 aaPredicted RBP16.37■□□□□ 0.21
TTC28-204ENST00000468807 GPX8Q8TED1 209 aa16.37■□□□□ 0.21
TTC28-204ENST00000468807 HIPK2Q9H2X6 1198 aa16.37■□□□□ 0.21
TTC28-204ENST00000468807 UFC1Q9Y3C8 167 aa16.37■□□□□ 0.21
TTC28-204ENST00000468807 TGOLN2O43493 480 aa16.36■□□□□ 0.21
TTC28-204ENST00000468807 HPGDSO60760 199 aa16.36■□□□□ 0.21
TTC28-204ENST00000468807 RBPMS2Q6ZRY4 209 aaKnown RBP16.36■□□□□ 0.21
TTC28-204ENST00000468807 VN1R17PQ8TDU5 208 aa16.36■□□□□ 0.21
TTC28-204ENST00000468807 NDUFA4L2Q9NRX3 87 aa16.36■□□□□ 0.21
TTC28-204ENST00000468807 ELK1P19419 428 aa16.35■□□□□ 0.21
TTC28-204ENST00000468807 RNASE12Q5GAN4 147 aaKnown RBP16.35■□□□□ 0.21
TTC28-204ENST00000468807 LPCAT3Q6P1A2 487 aa16.35■□□□□ 0.21
TTC28-204ENST00000468807 TBC1D26Q86UD7 250 aa16.35■□□□□ 0.21
TTC28-204ENST00000468807 UBAC2Q8NBM4 344 aa16.35■□□□□ 0.21
TTC28-204ENST00000468807 MARC2Q969Z3 335 aa16.35■□□□□ 0.21
TTC28-204ENST00000468807 SCPEP1Q9HB40 452 aa16.35■□□□□ 0.21
TTC28-204ENST00000468807 PRNDQ9UKY0 176 aa16.35■□□□□ 0.21
TTC28-204ENST00000468807 F11RQ9Y624 299 aaKnown RBP16.35■□□□□ 0.21
TTC28-204ENST00000468807 FAM25AB3EWG3 89 aa16.34■□□□□ 0.21
TTC28-204ENST00000468807 FAM25CB3EWG5 89 aa16.34■□□□□ 0.21
TTC28-204ENST00000468807 FAM25GB3EWG6 89 aa16.34■□□□□ 0.21
TTC28-204ENST00000468807 RCVRNP35243 200 aa16.34■□□□□ 0.21
TTC28-204ENST00000468807 RORCP51449 518 aa16.34■□□□□ 0.21
TTC28-204ENST00000468807 ANKRD55Q3KP44 614 aa16.34■□□□□ 0.21
TTC28-204ENST00000468807 TMEM56Q96MV1 263 aa16.34■□□□□ 0.21
TTC28-204ENST00000468807 CMTM3Q96MX0 182 aa16.34■□□□□ 0.21
TTC28-204ENST00000468807 C21orf62Q9NYP8 219 aa16.34■□□□□ 0.21
TTC28-204ENST00000468807 MRPL27Q9P0M9 148 aaKnown RBP16.34■□□□□ 0.21
TTC28-204ENST00000468807 MFAP2P55001 183 aa16.33■□□□□ 0.2
TTC28-204ENST00000468807 Q56UQ5 140 aa16.33■□□□□ 0.2
TTC28-204ENST00000468807 BSCL2Q96G97 398 aaPredicted RBP16.33■□□□□ 0.2
TTC28-204ENST00000468807 TSC22D3Q99576 134 aa16.33■□□□□ 0.2
TTC28-204ENST00000468807 C20orf24Q9BUV8 137 aa16.33■□□□□ 0.2
TTC28-204ENST00000468807 ZNF436Q9C0F3 470 aaPredicted RBP16.33■□□□□ 0.2
TTC28-204ENST00000468807 FKBP11Q9NYL4 201 aa16.33■□□□□ 0.2
TTC28-204ENST00000468807 DBX1A6NMT0 343 aa16.32■□□□□ 0.2
TTC28-204ENST00000468807 M0QYG6 137 aa16.32■□□□□ 0.2
TTC28-204ENST00000468807 SLC38A6Q8IZM9 456 aa16.32■□□□□ 0.2
TTC28-204ENST00000468807 OR1L6Q8NGR2 347 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms