RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 IGKV1-16P04430 117 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 IGKV1D-39P04432 117 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 OR9G9P0C7N8 305 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 FAM106CPP0CH98 169 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 OPN1MW2P0DN77 364 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 OPN1MW3P0DN78 364 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 RRASP10301 218 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 MYOD1P15172 320 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 NQO2P16083 231 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 TMEM11P17152 192 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 CXCL3P19876 107 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 UCP1P25874 307 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 BRS3P32247 399 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 MC5RP33032 325 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 ARHGDIBP52566 201 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 S100A10P60903 97 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 ERVK-16P61578 105 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 GNB1P62873 340 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 RPP30P78346 268 aaKnown RBP3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 SRPXP78539 464 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 PLGLAQ15195 96 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 IAH1Q2TAA2 248 aaPredicted RBP3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 LRRC37A5PQ49AS3 106 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 SPINK9Q5DT21 86 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 C9orf152Q5JTZ5 239 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 THOC7Q6I9Y2 204 aaKnown RBP3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 FAM71F2Q6NXP2 309 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 H2BFWTQ7Z2G1 175 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 OR8H3Q8N146 312 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 OR11H7Q8NGC8 314 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 OR2T10Q8NGZ9 312 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 OR4A16Q8NH70 328 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 OR4S2Q8NH73 311 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 OR1S1Q8NH92 325 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 CD300LFQ8TDQ1 290 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 SCARB1Q8WTV0 552 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 FAM216AQ8WUB2 273 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 RBPMSQ93062 196 aaKnown RBP3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 RNF125Q96EQ8 232 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 GALNT14Q96FL9 552 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 OR10C1Q96KK4 312 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 HARBI1Q96MB7 349 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 TMEM56Q96MV1 263 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 SSX3Q99909 188 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 HINT2Q9BX68 163 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 MAGT1Q9H0U3 335 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 PPP1R14DQ9NXH3 145 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 SHPKQ9UHJ6 478 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 LSM5Q9Y4Y9 91 aaKnown RBP3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 TMEM56-RWDD3S4R434 201 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 CR1P17927 2039 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 VPS13CQ709C8 3753 aa3.25□□□□□ -1.89
TMEM39A-204ENST00000468545 ANK3Q12955 4377 aaKnown RBP3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 APCP25054 2843 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 A0A0G2JRQ6 117 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 A0A1W2PPI3 338 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 OOSP1A8MZH6 123 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 H3BUX3 64 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 UPK2O00526 184 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 TSPAN4O14817 238 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 TXNL1O43396 289 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 SLC25A17O43808 307 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 B3GALNT1O75752 331 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 SNAPC5O75971 98 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 OR2F2O95006 317 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 OR2A4O95047 310 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 VENTXO95231 258 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 CNIH1O95406 144 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 MOSP00540 346 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 HRASP01112 189 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 IFNA17P01571 189 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 FBP1P09467 338 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 SAA1P0DJI8 122 aaPredicted RBP3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 SULT1A3P0DMM9 295 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 SULT1A4P0DMN0 295 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 IAPPP10997 89 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 HNF1AP20823 631 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 VDAC1P21796 283 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 CD1BP29016 333 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 LGALS7P47929 136 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 ZNF137PP52743 207 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 F2RL1P55085 397 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 OR2B8PP59922 312 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 CD300CQ08708 224 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 PSG5Q15238 335 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 MMDQ15546 238 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 TNXAQ16473 311 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 LRRC75BQ2VPJ9 315 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 ODF3L2Q3SX64 289 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 VMA21Q3ZAQ7 101 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 OR4A47Q6IF82 309 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 RBMS3Q6XE24 437 aaKnown RBP3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 AKAP14Q86UN6 197 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 TMEM219Q86XT9 240 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 PDPNQ86YL7 162 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 TCTEX1D1Q8N7M0 179 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 SIGLECL1Q8N7X8 197 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 ZBTB8BQ8NAP8 495 aaPredicted RBP3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 OR4C13Q8NGP0 309 aa3.24□□□□□ -1.89
TMEM39A-204ENST00000468545 IL22RA2Q969J5 263 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms