RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ID3Q02535 119 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 ZNF816Q0VGE8 651 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-208ENST00000468300 FAM74A3Q4VXF1 159 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 CXorf66Q5JRM2 361 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-208ENST00000468300 PRSS54Q6PEW0 395 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 ZNF562Q6V9R5 426 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 LYG1Q8N1E2 194 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 C10orf105Q8TEF2 133 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 FAM208BQ5VWN6 2430 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 IGHV2-26A0A0B4J1V2 119 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 LY6LH3BQJ8 138 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 J3QKU1 62 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 M0R1X1 148 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 SLC25A6P12236 298 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 G6PCP35575 357 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 RAB5BP61020 215 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 GNB2P62879 340 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 DUX5Q96PT3 197 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 TET2Q6N021 2002 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-208ENST00000468300 A0A096LNT2 108 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 RNF212BA8MTL3 300 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 CFDP00746 253 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-208ENST00000468300 SERPINE2P07093 398 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 IL6RP08887 468 aaPredicted RBP6.7□□□□□ -1.34
BRCA1-208ENST00000468300 PAX9P55771 341 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 RPS16P62249 146 aaKnown RBP6.7□□□□□ -1.34
BRCA1-208ENST00000468300 COX19Q49B96 90 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 FAM74A1Q5RGS3 127 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 HIST2H2BCQ6DN03 193 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 TMUB2Q71RG4 321 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 ABHD12Q8N2K0 398 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 MMP26Q9NRE1 261 aa6.7□□□□□ -1.34
BRCA1-208ENST00000468300 SPTAN1Q13813 2472 aaKnown RBP6.69□□□□□ -1.34
BRCA1-208ENST00000468300 LOC105371242A0A075B767 164 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 FAM157AC9JC47 383 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 M0R036 132 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 MMP9P14780 707 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 ZNF345Q14585 488 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 TCTEX1D1Q8N7M0 179 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 PLEKHA2Q9HB19 425 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 POLR3KQ9Y2Y1 108 aaPredicted RBP6.69□□□□□ -1.34
BRCA1-208ENST00000468300 AUP1Q9Y679 476 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 IGHV4-30-2A0A087WSY4 118 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 IGHV4-61A0A0C4DH41 118 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 A0A1B0GU03 582 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 EREGO14944 169 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 RBFOX2O43251 390 aaKnown RBP eCLIP6.69□□□□□ -1.34
BRCA1-208ENST00000468300 IGKV1-16P04430 117 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 HKR1P10072 659 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 RRASP10301 218 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 S100GP29377 79 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 DEFA5Q01523 94 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 C5orf47Q569G3 176 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 KCNRGQ8N5I3 272 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 OR4P4Q8NGL7 312 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 MRPL20Q9BYC9 149 aaKnown RBP6.69□□□□□ -1.34
BRCA1-208ENST00000468300 GSX2Q9BZM3 304 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 SIRPDQ9H106 197 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 MMP24Q9Y5R2 645 aa6.69□□□□□ -1.34
BRCA1-208ENST00000468300 C20orf202A1L168 122 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 SRRM4A7MD48 611 aaKnown RBP6.68□□□□□ -1.34
BRCA1-208ENST00000468300 FCGR3BO75015 233 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 PDLIM4P50479 330 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 VKORC1L1Q8N0U8 176 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 OR5AN1Q8NGI8 311 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 OR9G1Q8NH87 305 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 AJUBAQ96IF1 538 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 AQP10Q96PS8 301 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 TMPRSS5Q9H3S3 457 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 DNAJC4Q9NNZ3 241 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 CYTL1Q9NRR1 136 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 GCN1Q92616 2671 aaKnown RBP6.68□□□□□ -1.34
BRCA1-208ENST00000468300 AKAP6Q13023 2319 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 ODF3BA8MYP8 253 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 NXPH3O95157 252 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 KRASP01116 189 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 OR9G9P0C7N8 305 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 LCN2P80188 198 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 FABP9Q0Z7S8 132 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 CATR1Q13166 79 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 OPCMLQ14982 345 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 ZNF787Q6DD87 383 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 BEND2Q8NDZ0 799 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 OR11H6Q8NGC7 330 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 COMMD9Q9P000 198 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 CACNG5Q9UF02 275 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 TRAV3A0A0B4J244 114 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 H0YJW9 148 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 BUB1B-PAK6H3BSN5 160 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 M0R1W7 72 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 PTTG1IPP53801 180 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 S100A10P60903 97 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 MRGPRG-AS1Q2M3A8 158 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 HLA-DRB5Q30154 266 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 FBLN7Q53RD9 439 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 CST9LP1Q5W188 147 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 FAM71F2Q6NXP2 309 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 ACOT7LQ6ZUV0 252 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 KIR3DL3Q8N743 410 aa6.68□□□□□ -1.34
BRCA1-208ENST00000468300 THAP6Q8TBB0 222 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms