RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 UBQLN2Q9UHD9 624 aa12.85□□□□□ -0.35
TRIM56-203ENST00000467847 A0A0A6YYH2 397 aa12.84□□□□□ -0.35
TRIM56-203ENST00000467847 NUPR2A6NF83 97 aa12.84□□□□□ -0.35
TRIM56-203ENST00000467847 OR2T8A6NH00 312 aa12.84□□□□□ -0.35
TRIM56-203ENST00000467847 A6NJ64 397 aa12.84□□□□□ -0.35
TRIM56-203ENST00000467847 S1PR2O95136 353 aa12.84□□□□□ -0.35
TRIM56-203ENST00000467847 LY6G6CO95867 125 aa12.84□□□□□ -0.35
TRIM56-203ENST00000467847 FGF2P09038 288 aa12.84□□□□□ -0.35
TRIM56-203ENST00000467847 RPA2P15927 270 aa12.84□□□□□ -0.35
TRIM56-203ENST00000467847 GDPD1Q8N9F7 314 aa12.84□□□□□ -0.35
TRIM56-203ENST00000467847 TMEM190Q8WZ59 177 aa12.84□□□□□ -0.35
TRIM56-203ENST00000467847 AUNIPQ9H7T9 357 aa12.84□□□□□ -0.35
TRIM56-203ENST00000467847 DAZ1Q9NQZ3 744 aaKnown RBP12.84□□□□□ -0.35
TRIM56-203ENST00000467847 TP53TG1Q9Y2A0 90 aa12.84□□□□□ -0.35
TRIM56-203ENST00000467847 TSPAN4O14817 238 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 SPRY2O43597 315 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 TRAPPC2P0DI81 140 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 TRAPPC2BP0DI82 140 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 OR13C7P0DN81 318 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 BMI1P35226 326 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 WT1-ASQ06250 92 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 TNFRSF9Q07011 255 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 DEFB135Q30KP9 77 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 THOC7Q6I9Y2 204 aaKnown RBP12.83□□□□□ -0.36
TRIM56-203ENST00000467847 Q6ZWC4 215 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 HSD17B13Q7Z5P4 300 aaPredicted RBP12.83□□□□□ -0.36
TRIM56-203ENST00000467847 LYG2Q86SG7 212 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 WFDC3Q8IUB2 231 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 OR5AP2Q8NGF4 316 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 GIMAP1Q8WWP7 306 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 BSCL2Q96G97 398 aaPredicted RBP12.83□□□□□ -0.36
TRIM56-203ENST00000467847 RNF167Q9H6Y7 350 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 DIABLOQ9NR28 239 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 COMMD9Q9P000 198 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 HERC2O95714 4834 aa12.83□□□□□ -0.36
TRIM56-203ENST00000467847 LOC100506127A0A0U1RQW1 187 aa12.82□□□□□ -0.36
TRIM56-203ENST00000467847 TEX50A0A1B0GTY4 177 aa12.82□□□□□ -0.36
TRIM56-203ENST00000467847 MEIS3P1A6NDR6 274 aa12.82□□□□□ -0.36
TRIM56-203ENST00000467847 SERPINE2P07093 398 aa12.82□□□□□ -0.36
TRIM56-203ENST00000467847 CBX5P45973 191 aa12.82□□□□□ -0.36
TRIM56-203ENST00000467847 HERV-K104P61576 105 aa12.82□□□□□ -0.36
TRIM56-203ENST00000467847 ERVK-16P61578 105 aa12.82□□□□□ -0.36
TRIM56-203ENST00000467847 EWSR1Q01844 656 aaKnown RBP eCLIP12.82□□□□□ -0.36
TRIM56-203ENST00000467847 LAMTOR1Q6IAA8 161 aa12.82□□□□□ -0.36
TRIM56-203ENST00000467847 SLC25A24Q6NUK1 477 aa12.82□□□□□ -0.36
TRIM56-203ENST00000467847 IGHV3-21A0A0B4J1V1 117 aa12.81□□□□□ -0.36
TRIM56-203ENST00000467847 MARCH11A6NNE9 402 aa12.81□□□□□ -0.36
TRIM56-203ENST00000467847 UBE2CO00762 179 aa12.81□□□□□ -0.36
TRIM56-203ENST00000467847 SPSB3Q6PJ21 355 aa12.81□□□□□ -0.36
TRIM56-203ENST00000467847 STPG3Q8N7X2 389 aa12.81□□□□□ -0.36
TRIM56-203ENST00000467847 OR1L8Q8NGR8 309 aa12.81□□□□□ -0.36
TRIM56-203ENST00000467847 BORCS5Q969J3 196 aa12.81□□□□□ -0.36
TRIM56-203ENST00000467847 C20orf24Q9BUV8 137 aa12.81□□□□□ -0.36
TRIM56-203ENST00000467847 HINT2Q9BX68 163 aa12.81□□□□□ -0.36
TRIM56-203ENST00000467847 IFT46Q9NQC8 304 aa12.81□□□□□ -0.36
TRIM56-203ENST00000467847 C21orf62Q9NYP8 219 aa12.81□□□□□ -0.36
TRIM56-203ENST00000467847 KIR2DL5BA0A0G2JN68 375 aa12.8□□□□□ -0.36
TRIM56-203ENST00000467847 KIR2DL5BA0A0G2JPC4 375 aa12.8□□□□□ -0.36
TRIM56-203ENST00000467847 NDUFA4O00483 81 aa12.8□□□□□ -0.36
TRIM56-203ENST00000467847 RLN1P04808 185 aa12.8□□□□□ -0.36
TRIM56-203ENST00000467847 GNRHRP30968 328 aa12.8□□□□□ -0.36
TRIM56-203ENST00000467847 ODF3L2Q3SX64 289 aa12.8□□□□□ -0.36
TRIM56-203ENST00000467847 CEMP1Q6PRD7 247 aaPredicted RBP12.8□□□□□ -0.36
TRIM56-203ENST00000467847 KIR2DL5AQ8N109 375 aa12.8□□□□□ -0.36
TRIM56-203ENST00000467847 UBAC2Q8NBM4 344 aa12.8□□□□□ -0.36
TRIM56-203ENST00000467847 KIR2DL5BQ8NHK3 375 aa12.8□□□□□ -0.36
TRIM56-203ENST00000467847 LSM10Q969L4 123 aaKnown RBP12.8□□□□□ -0.36
TRIM56-203ENST00000467847 CHRDL1Q9BU40 450 aa12.8□□□□□ -0.36
TRIM56-203ENST00000467847 NDUFA4L2Q9NRX3 87 aa12.8□□□□□ -0.36
TRIM56-203ENST00000467847 EHFQ9NZC4 300 aa12.8□□□□□ -0.36
TRIM56-203ENST00000467847 F11RQ9Y624 299 aaKnown RBP12.8□□□□□ -0.36
TRIM56-203ENST00000467847 FRAS1Q86XX4 4008 aa12.79□□□□□ -0.36
TRIM56-203ENST00000467847 IGHV3OR16-8A0A075B7F1 116 aa12.79□□□□□ -0.36
TRIM56-203ENST00000467847 OR4C46A6NHA9 309 aa12.79□□□□□ -0.36
TRIM56-203ENST00000467847 ZNF207O43670 478 aaKnown RBP12.79□□□□□ -0.36
TRIM56-203ENST00000467847 RPL35AP18077 110 aaKnown RBP12.79□□□□□ -0.36
TRIM56-203ENST00000467847 MFAP2P55001 183 aa12.79□□□□□ -0.36
TRIM56-203ENST00000467847 SCARB1Q8WTV0 552 aa12.79□□□□□ -0.36
TRIM56-203ENST00000467847 RNF183Q96D59 192 aa12.79□□□□□ -0.36
TRIM56-203ENST00000467847 ATP6V0BQ99437 205 aa12.79□□□□□ -0.36
TRIM56-203ENST00000467847 Q9H521 79 aa12.79□□□□□ -0.36
TRIM56-203ENST00000467847 OR51B2Q9Y5P1 312 aa12.79□□□□□ -0.36
TRIM56-203ENST00000467847 PGLYRP1O75594 196 aaPredicted RBP12.78□□□□□ -0.36
TRIM56-203ENST00000467847 SNAPC5O75971 98 aa12.78□□□□□ -0.36
TRIM56-203ENST00000467847 KRASP01116 189 aa12.78□□□□□ -0.36
TRIM56-203ENST00000467847 F2RP25116 425 aa12.78□□□□□ -0.36
TRIM56-203ENST00000467847 LPAR6P43657 344 aa12.78□□□□□ -0.36
TRIM56-203ENST00000467847 RFX2P48378 723 aa12.78□□□□□ -0.36
TRIM56-203ENST00000467847 Q56UQ5 140 aa12.78□□□□□ -0.36
TRIM56-203ENST00000467847 TMEM217Q8N7C4 229 aa12.78□□□□□ -0.36
TRIM56-203ENST00000467847 TSPAN14Q8NG11 270 aa12.78□□□□□ -0.36
TRIM56-203ENST00000467847 ZNF2Q9BSG1 426 aaPredicted RBP12.78□□□□□ -0.36
TRIM56-203ENST00000467847 YTHDF1Q9BYJ9 559 aaKnown RBP12.78□□□□□ -0.36
TRIM56-203ENST00000467847 NSG2Q9Y328 171 aa12.78□□□□□ -0.36
TRIM56-203ENST00000467847 KLK5Q9Y337 293 aaPredicted RBP12.78□□□□□ -0.36
TRIM56-203ENST00000467847 F8W735 103 aaPredicted RBP12.77□□□□□ -0.37
TRIM56-203ENST00000467847 K7EMT4 169 aa12.77□□□□□ -0.37
TRIM56-203ENST00000467847 XRCC3O43542 346 aa12.77□□□□□ -0.37
TRIM56-203ENST00000467847 CTSDP07339 412 aaPredicted RBP12.77□□□□□ -0.37
TRIM56-203ENST00000467847 ATF4P18848 351 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms