RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 FGF2P09038 288 aa14.33□□□□□ -0.12
COL9A3-206ENST00000466532 C8orf88P0DMB2 117 aa14.33□□□□□ -0.12
COL9A3-206ENST00000466532 PTBP1P26599 531 aaKnown RBP eCLIP14.33□□□□□ -0.12
COL9A3-206ENST00000466532 ERVK-16P61578 105 aa14.33□□□□□ -0.12
COL9A3-206ENST00000466532 THOC7Q6I9Y2 204 aaKnown RBP14.33□□□□□ -0.12
COL9A3-206ENST00000466532 RBPMS2Q6ZRY4 209 aaKnown RBP14.33□□□□□ -0.12
COL9A3-206ENST00000466532 GDPD1Q8N9F7 314 aa14.33□□□□□ -0.12
COL9A3-206ENST00000466532 S100A16Q96FQ6 103 aaKnown RBP14.33□□□□□ -0.12
COL9A3-206ENST00000466532 GGTLC1Q9BX51 225 aa14.33□□□□□ -0.12
COL9A3-206ENST00000466532 MRPL27Q9P0M9 148 aaKnown RBP14.33□□□□□ -0.12
COL9A3-206ENST00000466532 ALMS1Q8TCU4 4167 aa14.32□□□□□ -0.12
COL9A3-206ENST00000466532 LOC102724200A0A096LPH7 203 aaPredicted RBP14.32□□□□□ -0.12
COL9A3-206ENST00000466532 TRAV25A0A0B4J276 109 aa14.32□□□□□ -0.12
COL9A3-206ENST00000466532 TEX50A0A1B0GTY4 177 aa14.32□□□□□ -0.12
COL9A3-206ENST00000466532 TGOLN2O43493 480 aa14.32□□□□□ -0.12
COL9A3-206ENST00000466532 RLN1P04808 185 aa14.32□□□□□ -0.12
COL9A3-206ENST00000466532 TRAPPC2P0DI81 140 aa14.32□□□□□ -0.12
COL9A3-206ENST00000466532 TRAPPC2BP0DI82 140 aa14.32□□□□□ -0.12
COL9A3-206ENST00000466532 OR13C7P0DN81 318 aa14.32□□□□□ -0.12
COL9A3-206ENST00000466532 TGFBR1P36897 503 aa14.32□□□□□ -0.12
COL9A3-206ENST00000466532 RFX2P48378 723 aa14.32□□□□□ -0.12
COL9A3-206ENST00000466532 ELLP55199 621 aaPredicted RBP14.32□□□□□ -0.12
COL9A3-206ENST00000466532 CROCCP3Q8IVE0 287 aa14.32□□□□□ -0.12
COL9A3-206ENST00000466532 VN1R17PQ8TDU5 208 aa14.32□□□□□ -0.12
COL9A3-206ENST00000466532 ZNF2Q9BSG1 426 aaPredicted RBP14.32□□□□□ -0.12
COL9A3-206ENST00000466532 ZNF436Q9C0F3 470 aaPredicted RBP14.32□□□□□ -0.12
COL9A3-206ENST00000466532 MARCH11A6NNE9 402 aa14.31□□□□□ -0.12
COL9A3-206ENST00000466532 PMP2P02689 132 aa14.31□□□□□ -0.12
COL9A3-206ENST00000466532 SERPINE2P07093 398 aa14.31□□□□□ -0.12
COL9A3-206ENST00000466532 F2RP25116 425 aa14.31□□□□□ -0.12
COL9A3-206ENST00000466532 WT1-ASQ06250 92 aa14.31□□□□□ -0.12
COL9A3-206ENST00000466532 KCTD21Q4G0X4 260 aa14.31□□□□□ -0.12
COL9A3-206ENST00000466532 UBE2NLQ5JXB2 153 aa14.31□□□□□ -0.12
COL9A3-206ENST00000466532 SLC25A24Q6NUK1 477 aa14.31□□□□□ -0.12
COL9A3-206ENST00000466532 DHRS11Q6UWP2 260 aa14.31□□□□□ -0.12
COL9A3-206ENST00000466532 HSD17B13Q7Z5P4 300 aaPredicted RBP14.31□□□□□ -0.12
COL9A3-206ENST00000466532 OR1L6Q8NGR2 347 aa14.31□□□□□ -0.12
COL9A3-206ENST00000466532 OR1L8Q8NGR8 309 aa14.31□□□□□ -0.12
COL9A3-206ENST00000466532 MOB3AQ96BX8 217 aa14.31□□□□□ -0.12
COL9A3-206ENST00000466532 OR2T8A6NH00 312 aa14.3□□□□□ -0.12
COL9A3-206ENST00000466532 PGLYRP1O75594 196 aaPredicted RBP14.3□□□□□ -0.12
COL9A3-206ENST00000466532 TMEM69Q5SWH9 247 aa14.3□□□□□ -0.12
COL9A3-206ENST00000466532 OR5H2Q8NGV7 314 aa14.3□□□□□ -0.12
COL9A3-206ENST00000466532 TMEM190Q8WZ59 177 aa14.3□□□□□ -0.12
COL9A3-206ENST00000466532 OVOL2Q9BRP0 275 aa14.3□□□□□ -0.12
COL9A3-206ENST00000466532 HINT2Q9BX68 163 aa14.3□□□□□ -0.12
COL9A3-206ENST00000466532 ANAPC10Q9UM13 185 aa14.3□□□□□ -0.12
COL9A3-206ENST00000466532 LPAR6P43657 344 aa14.29□□□□□ -0.12
COL9A3-206ENST00000466532 TAS2R46P59540 309 aa14.29□□□□□ -0.12
COL9A3-206ENST00000466532 TAS2R20P59543 309 aa14.29□□□□□ -0.12
COL9A3-206ENST00000466532 CMTM1Q8IZ96 169 aa14.29□□□□□ -0.12
COL9A3-206ENST00000466532 OR2C3Q8N628 320 aa14.29□□□□□ -0.12
COL9A3-206ENST00000466532 SAMD12Q8N8I0 201 aa14.29□□□□□ -0.12
COL9A3-206ENST00000466532 FCAMRQ8WWV6 532 aa14.29□□□□□ -0.12
COL9A3-206ENST00000466532 LSM10Q969L4 123 aaKnown RBP14.29□□□□□ -0.12
COL9A3-206ENST00000466532 DGCR14Q96DF8 476 aaKnown RBP14.29□□□□□ -0.12
COL9A3-206ENST00000466532 C5orf66Q9H5L9 145 aa14.29□□□□□ -0.12
COL9A3-206ENST00000466532 NDUFA4L2Q9NRX3 87 aa14.29□□□□□ -0.12
COL9A3-206ENST00000466532 NSG2Q9Y328 171 aa14.29□□□□□ -0.12
COL9A3-206ENST00000466532 IGHV3-21A0A0B4J1V1 117 aa14.28□□□□□ -0.12
COL9A3-206ENST00000466532 SNAPC5O75971 98 aa14.28□□□□□ -0.12
COL9A3-206ENST00000466532 KRASP01116 189 aa14.28□□□□□ -0.12
COL9A3-206ENST00000466532 G6PCP35575 357 aa14.28□□□□□ -0.12
COL9A3-206ENST00000466532 RPS19P39019 145 aaKnown RBP14.28□□□□□ -0.12
COL9A3-206ENST00000466532 MFAP2P55001 183 aa14.28□□□□□ -0.12
COL9A3-206ENST00000466532 SLC38A6Q8IZM9 456 aa14.28□□□□□ -0.12
COL9A3-206ENST00000466532 TSPAN14Q8NG11 270 aa14.28□□□□□ -0.12
COL9A3-206ENST00000466532 BSCL2Q96G97 398 aaPredicted RBP14.28□□□□□ -0.12
COL9A3-206ENST00000466532 SPAG8Q99932 426 aaPredicted RBP14.28□□□□□ -0.12
COL9A3-206ENST00000466532 FXYD6Q9H0Q3 95 aa14.28□□□□□ -0.12
COL9A3-206ENST00000466532 DAZ1Q9NQZ3 744 aaKnown RBP14.28□□□□□ -0.12
COL9A3-206ENST00000466532 OR51B2Q9Y5P1 312 aa14.28□□□□□ -0.12
COL9A3-206ENST00000466532 F11RQ9Y624 299 aaKnown RBP14.28□□□□□ -0.12
COL9A3-206ENST00000466532 GPR31O00270 319 aa14.27□□□□□ -0.13
COL9A3-206ENST00000466532 NAT1P18440 290 aa14.27□□□□□ -0.13
COL9A3-206ENST00000466532 LSM3P62310 102 aaKnown RBP14.27□□□□□ -0.13
COL9A3-206ENST00000466532 SPSB3Q6PJ21 355 aa14.27□□□□□ -0.13
COL9A3-206ENST00000466532 OR6F1Q8NGZ6 308 aa14.27□□□□□ -0.13
COL9A3-206ENST00000466532 C21orf62Q9NYP8 219 aa14.27□□□□□ -0.13
COL9A3-206ENST00000466532 UBQLN2Q9UHD9 624 aa14.27□□□□□ -0.13
COL9A3-206ENST00000466532 NDUFA4O00483 81 aa14.26□□□□□ -0.13
COL9A3-206ENST00000466532 TSPAN4O14817 238 aa14.26□□□□□ -0.13
COL9A3-206ENST00000466532 PRSS3P35030 304 aa14.26□□□□□ -0.13
COL9A3-206ENST00000466532 CADM3Q8N126 398 aa14.26□□□□□ -0.13
COL9A3-206ENST00000466532 UBAC2Q8NBM4 344 aa14.26□□□□□ -0.13
COL9A3-206ENST00000466532 SCARB1Q8WTV0 552 aa14.26□□□□□ -0.13
COL9A3-206ENST00000466532 ATP6V0BQ99437 205 aa14.26□□□□□ -0.13
COL9A3-206ENST00000466532 CHRDL1Q9BU40 450 aa14.26□□□□□ -0.13
COL9A3-206ENST00000466532 C20orf24Q9BUV8 137 aa14.26□□□□□ -0.13
COL9A3-206ENST00000466532 HRH1P35367 487 aa14.25□□□□□ -0.13
COL9A3-206ENST00000466532 APOC4P55056 127 aa14.25□□□□□ -0.13
COL9A3-206ENST00000466532 PHLDA2Q53GA4 152 aa14.25□□□□□ -0.13
COL9A3-206ENST00000466532 Q56UQ5 140 aa14.25□□□□□ -0.13
COL9A3-206ENST00000466532 LAMTOR1Q6IAA8 161 aa14.25□□□□□ -0.13
COL9A3-206ENST00000466532 YIPF6Q96EC8 236 aa14.25□□□□□ -0.13
COL9A3-206ENST00000466532 TMEM56Q96MV1 263 aa14.25□□□□□ -0.13
COL9A3-206ENST00000466532 FKBP11Q9NYL4 201 aa14.25□□□□□ -0.13
COL9A3-206ENST00000466532 PRNDQ9UKY0 176 aa14.25□□□□□ -0.13
COL9A3-206ENST00000466532 IGHV3OR16-8A0A075B7F1 116 aa14.24□□□□□ -0.13
COL9A3-206ENST00000466532 F8W735 103 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms