RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 HPRT1P00492 218 aa15.27■□□□□ 0.04
COL6A1-203ENST00000466285 RLN1P04808 185 aa15.27■□□□□ 0.04
COL6A1-203ENST00000466285 NQO2P16083 231 aa15.27■□□□□ 0.04
COL6A1-203ENST00000466285 ADMP35318 185 aa15.27■□□□□ 0.04
COL6A1-203ENST00000466285 ZNF124Q15973 351 aa15.27■□□□□ 0.04
COL6A1-203ENST00000466285 PLET1Q6UQ28 207 aa15.27■□□□□ 0.04
COL6A1-203ENST00000466285 GDPD1Q8N9F7 314 aa15.27■□□□□ 0.04
COL6A1-203ENST00000466285 FXYD6Q9H0Q3 95 aa15.27■□□□□ 0.04
COL6A1-203ENST00000466285 ETV7Q9Y603 341 aa15.27■□□□□ 0.04
COL6A1-203ENST00000466285 TEX50A0A1B0GTY4 177 aa15.26■□□□□ 0.03
COL6A1-203ENST00000466285 CXorf65A6NEN9 183 aa15.26■□□□□ 0.03
COL6A1-203ENST00000466285 SMIM18P0DKX4 95 aa15.26■□□□□ 0.03
COL6A1-203ENST00000466285 OR13C7P0DN81 318 aa15.26■□□□□ 0.03
COL6A1-203ENST00000466285 PTBP1P26599 531 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL6A1-203ENST00000466285 GNRHRP30968 328 aa15.26■□□□□ 0.03
COL6A1-203ENST00000466285 LYG2Q86SG7 212 aa15.26■□□□□ 0.03
COL6A1-203ENST00000466285 DMBX1Q8NFW5 382 aa15.26■□□□□ 0.03
COL6A1-203ENST00000466285 COMMD5Q9GZQ3 224 aa15.26■□□□□ 0.03
COL6A1-203ENST00000466285 MRPL27Q9P0M9 148 aaKnown RBP15.26■□□□□ 0.03
COL6A1-203ENST00000466285 CATR1Q13166 79 aa15.25■□□□□ 0.03
COL6A1-203ENST00000466285 RBPMS2Q6ZRY4 209 aaKnown RBP15.25■□□□□ 0.03
COL6A1-203ENST00000466285 ZBTB34Q8NCN2 500 aa15.25■□□□□ 0.03
COL6A1-203ENST00000466285 FCGR1BQ92637 280 aa15.25■□□□□ 0.03
COL6A1-203ENST00000466285 UFC1Q9Y3C8 167 aa15.25■□□□□ 0.03
COL6A1-203ENST00000466285 TRAV25A0A0B4J276 109 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 K7EIM0 57 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 LY6G6CO95867 125 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 SERPINE2P07093 398 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 RPL35AP18077 110 aaKnown RBP15.24■□□□□ 0.03
COL6A1-203ENST00000466285 RFX2P48378 723 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 NEDD8Q15843 81 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 OR2C3Q8N628 320 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 TSPAN14Q8NG11 270 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 OR5AP2Q8NGF4 316 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 GIMAP1Q8WWP7 306 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 FCAMRQ8WWV6 532 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 MARC2Q969Z3 335 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 SPAG8Q99932 426 aaPredicted RBP15.24■□□□□ 0.03
COL6A1-203ENST00000466285 C5orf66Q9H5L9 145 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 PLEKHA2Q9HB19 425 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 EHFQ9NZC4 300 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 COMMD9Q9P000 198 aa15.24■□□□□ 0.03
COL6A1-203ENST00000466285 HERC2O95714 4834 aa15.23■□□□□ 0.03
COL6A1-203ENST00000466285 A0A087WXM4 84 aa15.23■□□□□ 0.03
COL6A1-203ENST00000466285 MARCH11A6NNE9 402 aa15.23■□□□□ 0.03
COL6A1-203ENST00000466285 FCGR2BP31994 310 aaPredicted RBP15.23■□□□□ 0.03
COL6A1-203ENST00000466285 ELLP55199 621 aaPredicted RBP15.23■□□□□ 0.03
COL6A1-203ENST00000466285 VN1R17PQ8TDU5 208 aa15.23■□□□□ 0.03
COL6A1-203ENST00000466285 SCARB1Q8WTV0 552 aa15.23■□□□□ 0.03
COL6A1-203ENST00000466285 HINT2Q9BX68 163 aa15.23■□□□□ 0.03
COL6A1-203ENST00000466285 NDUFA4L2Q9NRX3 87 aa15.23■□□□□ 0.03
COL6A1-203ENST00000466285 ANAPC10Q9UM13 185 aa15.23■□□□□ 0.03
COL6A1-203ENST00000466285 DNAH6Q9C0G6 4158 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 IGHV3-49A0A0A0MS15 119 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 TSPAN4O14817 238 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 SPRY2O43597 315 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 PMP2P02689 132 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 TRAPPC2P0DI81 140 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 TRAPPC2BP0DI82 140 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 G6PCP35575 357 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 SCAND1P57086 179 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 TNFRSF9Q07011 255 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 ANKRD55Q3KP44 614 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 SLC25A24Q6NUK1 477 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 WFDC3Q8IUB2 231 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 SRSF8Q9BRL6 282 aaKnown RBP15.22■□□□□ 0.03
COL6A1-203ENST00000466285 C20orf24Q9BUV8 137 aa15.22■□□□□ 0.03
COL6A1-203ENST00000466285 DAZ1Q9NQZ3 744 aaKnown RBP15.22■□□□□ 0.03
COL6A1-203ENST00000466285 F11RQ9Y624 299 aaKnown RBP15.22■□□□□ 0.03
COL6A1-203ENST00000466285 PGLYRP1O75594 196 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-203ENST00000466285 LPAR6P43657 344 aa15.21■□□□□ 0.03
COL6A1-203ENST00000466285 HERV-K104P61576 105 aa15.21■□□□□ 0.03
COL6A1-203ENST00000466285 APRG1Q8IVJ8 170 aa15.21■□□□□ 0.03
COL6A1-203ENST00000466285 RPP25LQ8N5L8 163 aaKnown RBP15.21■□□□□ 0.03
COL6A1-203ENST00000466285 UBAC2Q8NBM4 344 aa15.21■□□□□ 0.03
COL6A1-203ENST00000466285 MOB3AQ96BX8 217 aa15.21■□□□□ 0.03
COL6A1-203ENST00000466285 ZNF2Q9BSG1 426 aaPredicted RBP15.21■□□□□ 0.03
COL6A1-203ENST00000466285 C21orf62Q9NYP8 219 aa15.21■□□□□ 0.03
COL6A1-203ENST00000466285 A0A0A6YYH2 397 aa15.2■□□□□ 0.02
COL6A1-203ENST00000466285 A6NJ64 397 aa15.2■□□□□ 0.02
COL6A1-203ENST00000466285 KRASP01116 189 aa15.2■□□□□ 0.02
COL6A1-203ENST00000466285 CTSDP07339 412 aaPredicted RBP15.2■□□□□ 0.02
COL6A1-203ENST00000466285 OR5B3Q8NH48 314 aa15.2■□□□□ 0.02
COL6A1-203ENST00000466285 BSCL2Q96G97 398 aaPredicted RBP15.2■□□□□ 0.02
COL6A1-203ENST00000466285 NDUFA4O00483 81 aa15.19■□□□□ 0.02
COL6A1-203ENST00000466285 IGHV3-48P01763 117 aa15.19■□□□□ 0.02
COL6A1-203ENST00000466285 F2RP25116 425 aa15.19■□□□□ 0.02
COL6A1-203ENST00000466285 CEMP1Q6PRD7 247 aaPredicted RBP15.19■□□□□ 0.02
COL6A1-203ENST00000466285 Q6ZWC4 215 aa15.19■□□□□ 0.02
COL6A1-203ENST00000466285 OR1L8Q8NGR8 309 aa15.19■□□□□ 0.02
COL6A1-203ENST00000466285 LSM10Q969L4 123 aaKnown RBP15.19■□□□□ 0.02
COL6A1-203ENST00000466285 RNF183Q96D59 192 aa15.19■□□□□ 0.02
COL6A1-203ENST00000466285 RNF2Q99496 336 aa15.19■□□□□ 0.02
COL6A1-203ENST00000466285 KRTAP17-1Q9BYP8 105 aa15.19■□□□□ 0.02
COL6A1-203ENST00000466285 IFT46Q9NQC8 304 aa15.19■□□□□ 0.02
COL6A1-203ENST00000466285 TP53TG1Q9Y2A0 90 aa15.19■□□□□ 0.02
COL6A1-203ENST00000466285 OR51B2Q9Y5P1 312 aa15.19■□□□□ 0.02
COL6A1-203ENST00000466285 HECTD4Q9Y4D8 3996 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 IGHV3OR16-13A0A075B7E8 117 aa15.18■□□□□ 0.02
COL6A1-203ENST00000466285 IGHV3-74A0A0B4J1X5 117 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms