RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 CXorf66Q5JRM2 361 aaPredicted RBP8.76□□□□□ -1.01
VCP-204ENST00000466100 GSG1LQ6UXU4 331 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 OR1S1Q8NH92 325 aa8.76□□□□□ -1.01
VCP-204ENST00000466100 WIPF2Q8TF74 440 aaPredicted RBP8.76□□□□□ -1.01
VCP-204ENST00000466100 NOL4LQ96MY1 436 aaPredicted RBP8.76□□□□□ -1.01
VCP-204ENST00000466100 FYTTD1Q96QD9 318 aaKnown RBP8.76□□□□□ -1.01
VCP-204ENST00000466100 SRSF8Q9BRL6 282 aaKnown RBP8.76□□□□□ -1.01
VCP-204ENST00000466100 C13orf42A0A1B0GVH6 325 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 HMX3A6NHT5 357 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 MSGN1A6NI15 193 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 G3V318 75 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 RBMXL2O75526 392 aaKnown RBP8.75□□□□□ -1.01
VCP-204ENST00000466100 NXPH3O95157 252 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 CRYBA1P05813 215 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 TRAPPC2P0DI81 140 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 TRAPPC2BP0DI82 140 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 HKR1P10072 659 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 AREGP15514 252 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 VDAC2P45880 294 aaPredicted RBP8.75□□□□□ -1.01
VCP-204ENST00000466100 SPINK9Q5DT21 86 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 C11orf87Q6NUJ2 197 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 STPG2Q8N412 459 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.75□□□□□ -1.01
VCP-204ENST00000466100 OR10W1Q8NGF6 305 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 LINC01006Q8NI28 216 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 CHAC2Q8WUX2 184 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 NMES1Q9C002 83 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 WNT10AQ9GZT5 417 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 RBKSQ9H477 322 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 CACFD1Q9UGQ2 172 aa8.75□□□□□ -1.01
VCP-204ENST00000466100 RCL1Q9Y2P8 373 aaKnown RBP8.75□□□□□ -1.01
VCP-204ENST00000466100 IFNA17P01571 189 aa8.74□□□□□ -1.01
VCP-204ENST00000466100 MBPP02686 304 aaPredicted RBP8.74□□□□□ -1.01
VCP-204ENST00000466100 CTRB1P17538 263 aa8.74□□□□□ -1.01
VCP-204ENST00000466100 PPIFP30405 207 aaKnown RBP8.74□□□□□ -1.01
VCP-204ENST00000466100 NKX2-1P43699 371 aaPredicted RBP8.74□□□□□ -1.01
VCP-204ENST00000466100 KRTAP24-1Q3LI83 254 aa8.74□□□□□ -1.01
VCP-204ENST00000466100 AKIRIN2Q53H80 203 aa8.74□□□□□ -1.01
VCP-204ENST00000466100 CTRB2Q6GPI1 263 aa8.74□□□□□ -1.01
VCP-204ENST00000466100 HSD17B13Q7Z5P4 300 aaPredicted RBP8.74□□□□□ -1.01
VCP-204ENST00000466100 LFNGQ8NES3 379 aa8.74□□□□□ -1.01
VCP-204ENST00000466100 OR2T6Q8NHC8 308 aa8.74□□□□□ -1.01
VCP-204ENST00000466100 HINT2Q9BX68 163 aa8.74□□□□□ -1.01
VCP-204ENST00000466100 ZNF436Q9C0F3 470 aaPredicted RBP8.74□□□□□ -1.01
VCP-204ENST00000466100 C11orf1Q9H5F2 150 aa8.74□□□□□ -1.01
VCP-204ENST00000466100 PLEKHA3Q9HB20 300 aa8.74□□□□□ -1.01
VCP-204ENST00000466100 GSKIPQ9P0R6 139 aa8.74□□□□□ -1.01
VCP-204ENST00000466100 LINC00527Q9UJ94 153 aa8.74□□□□□ -1.01
VCP-204ENST00000466100 hCG_2014768A0A024R1R8 64 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 TRAV41A0A0B4J266 112 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 A0A1W2PN81 502 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 NPIPB5A8MRT5 1133 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 K7EPK0 472 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 SYNGR2O43760 224 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 SOX15O60248 233 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 TMEM50AO95807 157 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 CRYGCP07315 174 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 GIPP09681 153 aaPredicted RBP8.73□□□□□ -1.01
VCP-204ENST00000466100 APELAP0DMC3 54 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 CHRNA7P36544 502 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 BCAP31P51572 246 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 POLR2GP62487 172 aaKnown RBP eCLIP8.73□□□□□ -1.01
VCP-204ENST00000466100 ECSCRQ19T08 205 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 KLK9Q2XQG4 91 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 BSXQ3C1V8 233 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 UNQ5815/PRO19632Q6UWF5 114 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 C19orf35Q6ZS72 473 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 TTC9CQ8N5M4 171 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 OR2C3Q8N628 320 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 ZNF114Q8NC26 417 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 OR4F5Q8NH21 305 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 FAM110DQ8TAY7 271 aaPredicted RBP8.73□□□□□ -1.01
VCP-204ENST00000466100 ABHD5Q8WTS1 349 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 ASB13Q8WXK3 278 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 TMEM68Q96MH6 324 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 PDCD10Q9BUL8 212 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 MAGT1Q9H0U3 335 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 KLK9Q9UKQ9 250 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 WSB1Q9Y6I7 421 aa8.73□□□□□ -1.01
VCP-204ENST00000466100 CEBPZOSA8MTT3 80 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 G3V3Q6 166 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 FBXO24O75426 580 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 SCGB1D2O95969 90 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 IGLV1-40P01703 118 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 REG1AP05451 166 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 OR13C7P0DN81 318 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 MDKP21741 143 aaPredicted RBP8.72□□□□□ -1.01
VCP-204ENST00000466100 PSMB6P28072 239 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 HOXA1P49639 335 aaPredicted RBP8.72□□□□□ -1.01
VCP-204ENST00000466100 PAX9P55771 341 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 PROK1P58294 105 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 CYCSP99999 105 aaKnown RBP8.72□□□□□ -1.01
VCP-204ENST00000466100 TMEM267Q0VDI3 215 aaPredicted RBP8.72□□□□□ -1.01
VCP-204ENST00000466100 RAB32Q13637 225 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 PVRIGQ6DKI7 326 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 C10orf99Q6UWK7 81 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 DTD1Q8TEA8 209 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 TMEM170AQ8WVE7 144 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 PPP1R1CQ8WVI7 109 aa8.72□□□□□ -1.01
VCP-204ENST00000466100 DMRT1Q9Y5R6 373 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms