RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 PLXNB1O43157 2135 aa15.27■□□□□ 0.03
TSPAN4-210ENST00000464987 RPL31P62899 125 aaKnown RBP15.27■□□□□ 0.03
TSPAN4-210ENST00000464987 SPATA31B1PQ5VZV4 182 aa15.27■□□□□ 0.03
TSPAN4-210ENST00000464987 SPACA3Q8IXA5 215 aa15.27■□□□□ 0.03
TSPAN4-210ENST00000464987 CCL17Q92583 94 aa15.27■□□□□ 0.03
TSPAN4-210ENST00000464987 CTDSP1Q9GZU7 261 aa15.27■□□□□ 0.03
TSPAN4-210ENST00000464987 SAP30LQ9HAJ7 183 aa15.27■□□□□ 0.03
TSPAN4-210ENST00000464987 TRBV24-1A0A075B6N3 115 aa15.26■□□□□ 0.03
TSPAN4-210ENST00000464987 SOX15O60248 233 aa15.26■□□□□ 0.03
TSPAN4-210ENST00000464987 PFN1P07737 140 aaKnown RBP15.26■□□□□ 0.03
TSPAN4-210ENST00000464987 IL6RP08887 468 aaPredicted RBP15.26■□□□□ 0.03
TSPAN4-210ENST00000464987 ADTRPQ96IZ2 230 aa15.26■□□□□ 0.03
TSPAN4-210ENST00000464987 WFIKKN1Q96NZ8 548 aa15.26■□□□□ 0.03
TSPAN4-210ENST00000464987 PTPRQQ9UMZ3 2332 aa15.26■□□□□ 0.03
TSPAN4-210ENST00000464987 PIEZO1Q92508 2521 aa15.26■□□□□ 0.03
TSPAN4-210ENST00000464987 HRASP01112 189 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 REG1BP48304 166 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 POU2AF1Q16633 256 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 PDZD11Q5EBL8 140 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 SEPSECSQ9HD40 501 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 TLN1Q9Y490 2541 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 TRBV23-1A0A0A0MS06 115 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 PGPEP1LA6NFU8 196 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 NKX6-3A6NJ46 265 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 J3QR06 171 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 STAG3L2P0CL84 134 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 STAG3L3P0CL85 134 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 IGFBP2P18065 325 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 CDX1P47902 265 aaPredicted RBP15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 DIAPH2-AS1Q14236 149 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 TMEM200BQ69YZ2 307 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 MRPL20Q9BYC9 149 aaKnown RBP15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 ENY2Q9NPA8 101 aa15.25■□□□□ 0.03
TSPAN4-210ENST00000464987 TMEM178BH3BS89 294 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 UPK2O00526 184 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 SOD3P08294 240 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 TBR1Q16650 682 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 STPG3Q8N7X2 389 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 SSUH2Q9Y2M2 353 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 ZNF835Q9Y2P0 537 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 PPIAL4EA0A075B759 164 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 PPIAL4DF5H284 164 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 NDUFB4O95168 129 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 SAA1P0DJI8 122 aaPredicted RBP15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 PPIAL4FP0DN26 164 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 TEPPQ6URK8 271 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 H1FXQ92522 213 aaKnown RBP15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 PPIAL4AQ9Y536 164 aa15.24■□□□□ 0.03
TSPAN4-210ENST00000464987 TEX50A0A1B0GTY4 177 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 H7BYZ3 331 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 FOXH1O75593 365 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 GALR1P47211 349 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 EFNB3Q15768 340 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 MLANAQ16655 118 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 ZNF114Q8NC26 417 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 OR10W1Q8NGF6 305 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 ZNF714Q96N38 554 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 CTSZQ9UBR2 303 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 NAV3Q8IVL0 2385 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 LRBAP50851 2863 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 PRCDQ00LT1 54 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 ZNF124Q15973 351 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 RTL8BQ17RB0 113 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 TMEM249Q2WGJ8 235 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 ZNF833PQ6ZTB9 187 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 PLEKHA3Q9HB20 300 aa15.23■□□□□ 0.03
TSPAN4-210ENST00000464987 SCNM1Q9BWG6 230 aa15.22■□□□□ 0.03
TSPAN4-210ENST00000464987 GPR61Q9BZJ8 451 aa15.22■□□□□ 0.03
TSPAN4-210ENST00000464987 GAL3ST2Q9H3Q3 398 aa15.22■□□□□ 0.03
TSPAN4-210ENST00000464987 TMEM106BQ9NUM4 274 aa15.22■□□□□ 0.03
TSPAN4-210ENST00000464987 PRNDQ9UKY0 176 aa15.22■□□□□ 0.03
TSPAN4-210ENST00000464987 DCHS2Q6V1P9 2916 aa15.22■□□□□ 0.03
TSPAN4-210ENST00000464987 IGKV1OR2-108A0A075B7D4 117 aa15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 SHISA9B4DS77 424 aa15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 E7EUB6 86 aa15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 DMRTC2Q8IXT2 367 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 RNASE6Q93091 150 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 YTHDF2Q9Y5A9 579 aaKnown RBP15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 TRBV20OR9-2A0A075B6H5 130 aa15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 E7EQL1 145 aa15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 GATA2P23769 480 aaPredicted RBP15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 CHRNA7P36544 502 aa15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 LINC01551Q86U37 167 aa15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 OR10A7Q8NGE5 316 aa15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 PYGO2Q9BRQ0 406 aa15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 PCGF1Q9BSM1 259 aa15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 KCNIP2Q9NS61 270 aa15.21■□□□□ 0.03
TSPAN4-210ENST00000464987 SCO2A0A1W2PP80 73 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 A0A1W2PPQ1 181 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 TNFRSF13BO14836 293 aaPredicted RBP15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 PDE6DO43924 150 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 CXorf1O96002 111 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 FAM87AP0C7U9 286 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 CHRNB4P30926 498 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 CDPF1Q6NVV7 123 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 OR4X1Q8NH49 305 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 HARBI1Q96MB7 349 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 ZNF257Q9Y2Q1 563 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 DMRT1Q9Y5R6 373 aa15.2■□□□□ 0.02
TSPAN4-210ENST00000464987 H0YJW9 148 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms