RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 HMCN1Q96RW7 5635 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 TRBV10-2A0A0K0K1G8 114 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 MEIS3P1A6NDR6 274 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 OR51F1A6NGY5 319 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 CLDN24A6NM45 220 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 H3BT86 120 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 KPNA3O00505 521 aaPredicted RBP1.22□□□□□ -2.21
GARNL3-213ENST00000464616 SDCBPO00560 298 aaPredicted RBP1.22□□□□□ -2.21
GARNL3-213ENST00000464616 NSA2O95478 260 aaKnown RBP1.22□□□□□ -2.21
GARNL3-213ENST00000464616 NAPSAO96009 420 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 IGHV3-7P01780 117 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 C1QCP02747 245 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 CCL5P13501 91 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 HIST1H1TP22492 207 aaPredicted RBP1.22□□□□□ -2.21
GARNL3-213ENST00000464616 CDKN2CP42773 168 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 RPL28P46779 137 aaKnown RBP1.22□□□□□ -2.21
GARNL3-213ENST00000464616 ITGB3BPQ13352 177 aaPredicted RBP1.22□□□□□ -2.21
GARNL3-213ENST00000464616 ELOBQ15370 118 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 SPANXN3Q5MJ09 141 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 SAPCD1Q5SSQ6 148 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 C8orf74Q6P047 294 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 PACRGLQ8N7B6 248 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 CLDN22Q8N7P3 220 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 MRPL30Q8TCC3 161 aaKnown RBP1.22□□□□□ -2.21
GARNL3-213ENST00000464616 RASSF5Q8WWW0 418 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 MBD3L1Q8WWY6 194 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 NIPSNAP1Q9BPW8 284 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 NAA38Q9BRA0 125 aaKnown RBP1.22□□□□□ -2.21
GARNL3-213ENST00000464616 TTTY13Q9BZ97 58 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 C20orf27Q9GZN8 174 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 WDR61Q9GZS3 305 aaKnown RBP1.22□□□□□ -2.21
GARNL3-213ENST00000464616 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.22□□□□□ -2.21
GARNL3-213ENST00000464616 IL36BQ9NZH7 164 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 SLC22A13Q9Y226 551 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 NCKAP5O14513 1909 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 GBF1Q92538 1859 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 NCOA1Q15788 1441 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 KIF13BQ9NQT8 1826 aa1.22□□□□□ -2.21
GARNL3-213ENST00000464616 NUP155O75694 1391 aa1.21□□□□□ -2.21
GARNL3-213ENST00000464616 ADGRB3O60242 1522 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 GGT3PA6NGU5 568 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 J3QRK9 145 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 TTRP02766 147 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 TFPTP0C1Z6 253 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 IL9P15248 144 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 HIST1H2BOP23527 126 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 HIST1H2BBP33778 126 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 HIST1H2BDP58876 126 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 SNRPD2P62316 118 aaKnown RBP1.21□□□□□ -2.22
GARNL3-213ENST00000464616 HIST1H2BCP62807 126 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 HIST1H3AP68431 136 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 H3F3AP84243 136 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 SLC38A11Q08AI6 406 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 GUK1Q16774 197 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 HIST2H2BEQ16778 126 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 IAH1Q2TAA2 248 aaPredicted RBP1.21□□□□□ -2.22
GARNL3-213ENST00000464616 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.21□□□□□ -2.22
GARNL3-213ENST00000464616 DEFB128Q7Z7B8 93 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 COA5Q86WW8 74 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 LINC00471Q8N535 108 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 HIST1H2BHQ93079 126 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 TMEM106AQ96A25 262 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 TOMM6Q96B49 74 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 HIST1H2BNQ99877 126 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 HIST1H2BMQ99879 126 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 TRIM4Q9C037 500 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 OR51V1Q9H2C8 321 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 MIXL1Q9H2W2 232 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 UBAP1Q9NZ09 502 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 RBM7Q9Y580 266 aaKnown RBP1.21□□□□□ -2.22
GARNL3-213ENST00000464616 TIMM22Q9Y584 194 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 TMEM56-RWDD3S4R434 201 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 COL11A1P12107 1806 aaPredicted RBP1.21□□□□□ -2.22
GARNL3-213ENST00000464616 REREQ9P2R6 1566 aa1.21□□□□□ -2.22
GARNL3-213ENST00000464616 TRAV9-1A0A075B6T8 112 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 A0A0D9SEW6 157 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 A0A0D9SG52 128 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 FUOMA2VDF0 154 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 C19orf84I3L1E1 186 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 TRGC1P0CF51 173 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 ARL14EPLP0DKL9 152 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 HBA1P69905 142 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 CCL7P80098 99 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 MRPS25P82663 173 aaKnown RBP1.2□□□□□ -2.22
GARNL3-213ENST00000464616 AESQ08117 197 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 FADDQ13158 208 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 SLC36A1Q7Z2H8 476 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 DHFR2Q86XF0 187 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 ANKRD29Q8N6D5 301 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 OR51D1Q8NGF3 324 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 OR8B3Q8NGG8 313 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 BTF3L4Q96K17 158 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 MED9Q9NWA0 146 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 VWDEQ8N2E2 1590 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 CR1P17927 2039 aa1.2□□□□□ -2.22
GARNL3-213ENST00000464616 PTPRBP23467 1997 aa1.19□□□□□ -2.22
GARNL3-213ENST00000464616 A0A0J9YY10 115 aa1.19□□□□□ -2.22
GARNL3-213ENST00000464616 A0A1B0GVG6 124 aa1.19□□□□□ -2.22
GARNL3-213ENST00000464616 A0A1B0GX78 115 aa1.19□□□□□ -2.22
GARNL3-213ENST00000464616 TRAPPC13A5PLN9 417 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms