RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 KIAA1456Q9P272 454 aa15.22■□□□□ 0.03
CCDC78-206ENST00000463539 J3QLI3 93 aa15.22■□□□□ 0.03
CCDC78-206ENST00000463539 RRHO14718 337 aa15.22■□□□□ 0.03
CCDC78-206ENST00000463539 FAM106CPP0CH98 169 aa15.22■□□□□ 0.03
CCDC78-206ENST00000463539 SLC38A11Q08AI6 406 aa15.22■□□□□ 0.03
CCDC78-206ENST00000463539 C10orf55Q5SWW7 151 aa15.22■□□□□ 0.03
CCDC78-206ENST00000463539 SLC24A4Q8NFF2 622 aa15.22■□□□□ 0.03
CCDC78-206ENST00000463539 NPBQ8NG41 125 aa15.22■□□□□ 0.03
CCDC78-206ENST00000463539 SCAF4O95104 1147 aaKnown RBP15.21■□□□□ 0.03
CCDC78-206ENST00000463539 OR8U8P0C7N1 319 aa15.21■□□□□ 0.03
CCDC78-206ENST00000463539 MAS1LP35410 378 aa15.21■□□□□ 0.03
CCDC78-206ENST00000463539 RAB14P61106 215 aa15.21■□□□□ 0.03
CCDC78-206ENST00000463539 EBI3Q14213 229 aa15.21■□□□□ 0.03
CCDC78-206ENST00000463539 EIF5AL1Q6IS14 154 aaKnown RBP15.21■□□□□ 0.03
CCDC78-206ENST00000463539 OR10P1Q8NGE3 313 aa15.21■□□□□ 0.03
CCDC78-206ENST00000463539 TMED6Q8WW62 240 aa15.21■□□□□ 0.03
CCDC78-206ENST00000463539 A0A1W2PN81 502 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 CHRNA7P36544 502 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 TNXAQ16473 311 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 FBLN7Q53RD9 439 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 FAM74A1Q5RGS3 127 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 PINX1Q96BK5 328 aaKnown RBP15.2■□□□□ 0.02
CCDC78-206ENST00000463539 ARV1Q9H2C2 271 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 PMS2P5A8MQ11 134 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 NDUFA3O95167 84 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 AVPP01185 164 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 TMEM11P17152 192 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 NPY1RP25929 384 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 GNB1P62873 340 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 Q8N6K4 173 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 HSD17B11Q8NBQ5 300 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 WFDC11Q8NEX6 87 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 OR10W1Q8NGF6 305 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 GINS3Q9BRX5 216 aa15.2■□□□□ 0.02
CCDC78-206ENST00000463539 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.19■□□□□ 0.02
CCDC78-206ENST00000463539 CCDC168Q8NDH2 2452 aa15.19■□□□□ 0.02
CCDC78-206ENST00000463539 A0A0U1RQK1 487 aa15.19■□□□□ 0.02
CCDC78-206ENST00000463539 E7EUB6 86 aa15.19■□□□□ 0.02
CCDC78-206ENST00000463539 IFNA5P01569 189 aa15.19■□□□□ 0.02
CCDC78-206ENST00000463539 COMPP49747 757 aaPredicted RBP15.19■□□□□ 0.02
CCDC78-206ENST00000463539 RAB11AP62491 216 aa15.19■□□□□ 0.02
CCDC78-206ENST00000463539 SLC25A24Q6NUK1 477 aa15.19■□□□□ 0.02
CCDC78-206ENST00000463539 INS-IGF2F8WCM5 200 aa15.18■□□□□ 0.02
CCDC78-206ENST00000463539 FBXO24O75426 580 aa15.18■□□□□ 0.02
CCDC78-206ENST00000463539 CA2P00918 260 aa15.18■□□□□ 0.02
CCDC78-206ENST00000463539 RPL27AP46776 148 aaKnown RBP15.18■□□□□ 0.02
CCDC78-206ENST00000463539 KLF17Q5JT82 389 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-206ENST00000463539 CLLU1Q5K131 121 aa15.18■□□□□ 0.02
CCDC78-206ENST00000463539 FAM120AOSQ5T036 256 aa15.18■□□□□ 0.02
CCDC78-206ENST00000463539 TMEM170AQ8WVE7 144 aa15.18■□□□□ 0.02
CCDC78-206ENST00000463539 PCNPQ8WW12 178 aaKnown RBP15.18■□□□□ 0.02
CCDC78-206ENST00000463539 FOXC2Q99958 501 aa15.18■□□□□ 0.02
CCDC78-206ENST00000463539 FAM96BQ9Y3D0 163 aa15.18■□□□□ 0.02
CCDC78-206ENST00000463539 ITPR2Q14571 2701 aa15.18■□□□□ 0.02
CCDC78-206ENST00000463539 RPS10-NUDT3A0A1W2PQS6 291 aa15.17■□□□□ 0.02
CCDC78-206ENST00000463539 CGB1A6NKQ9 187 aa15.17■□□□□ 0.02
CCDC78-206ENST00000463539 NCBP2LA6PVI3 153 aaKnown RBP15.17■□□□□ 0.02
CCDC78-206ENST00000463539 IFNA4P05014 189 aa15.17■□□□□ 0.02
CCDC78-206ENST00000463539 SNCAP37840 140 aa15.17■□□□□ 0.02
CCDC78-206ENST00000463539 ERHP84090 104 aaKnown RBP15.17■□□□□ 0.02
CCDC78-206ENST00000463539 NDUFA5Q16718 116 aa15.17■□□□□ 0.02
CCDC78-206ENST00000463539 ATP6V1FQ16864 119 aa15.17■□□□□ 0.02
CCDC78-206ENST00000463539 C5orf64Q2M2E5 130 aa15.17■□□□□ 0.02
CCDC78-206ENST00000463539 ETV3LQ6ZN32 361 aa15.17■□□□□ 0.02
CCDC78-206ENST00000463539 MRPL41Q8IXM3 137 aaKnown RBP15.17■□□□□ 0.02
CCDC78-206ENST00000463539 A0A1B0GW64 132 aa15.17■□□□□ 0.02
CCDC78-206ENST00000463539 FCN1O00602 326 aa15.17■□□□□ 0.02
CCDC78-206ENST00000463539 ATP5IP56385 69 aaPredicted RBP15.17■□□□□ 0.02
CCDC78-206ENST00000463539 TMEM147Q9BVK8 224 aa15.17■□□□□ 0.02
CCDC78-206ENST00000463539 SLC25A32Q9H2D1 315 aa15.17■□□□□ 0.02
CCDC78-206ENST00000463539 TNCP24821 2201 aa15.16■□□□□ 0.02
CCDC78-206ENST00000463539 WT1-ASQ06250 92 aa15.16■□□□□ 0.02
CCDC78-206ENST00000463539 SH3BGRL3Q9H299 93 aa15.16■□□□□ 0.02
CCDC78-206ENST00000463539 UQCC1Q9NVA1 299 aa15.16■□□□□ 0.02
CCDC78-206ENST00000463539 C1RLQ9NZP8 487 aa15.16■□□□□ 0.02
CCDC78-206ENST00000463539 PDZD2O15018 2839 aa15.16■□□□□ 0.02
CCDC78-206ENST00000463539 UBE2L5PA0A1B0GUS4 154 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 CNIH1O95406 144 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 SEC11BP0C7V7 166 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 SPP1P10451 314 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 BSXQ3C1V8 233 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 CYB5R2Q6BCY4 276 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 SCGB1C1Q8TD33 95 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 GNPNAT1Q96EK6 184 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-206ENST00000463539 MEGF9Q9H1U4 602 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 NMBP08949 121 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 FBP1P09467 338 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 OR13C7P0DN81 318 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 ATP6V0CP27449 155 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 SSBP2P81877 361 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-206ENST00000463539 C2orf83Q53S99 150 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 RNF141Q8WVD5 230 aa15.15■□□□□ 0.02
CCDC78-206ENST00000463539 SRSF12Q8WXF0 261 aaKnown RBP15.15■□□□□ 0.02
CCDC78-206ENST00000463539 TET2Q6N021 2002 aaPredicted RBP15.15■□□□□ 0.02
CCDC78-206ENST00000463539 ITPR3Q14573 2671 aa15.14■□□□□ 0.01
CCDC78-206ENST00000463539 ZANQ9Y493 2812 aa15.14■□□□□ 0.01
CCDC78-206ENST00000463539 IGLC7A0M8Q6 106 aa15.14■□□□□ 0.01
CCDC78-206ENST00000463539 PRSS46E5RG02 174 aa15.14■□□□□ 0.01
CCDC78-206ENST00000463539 RNASE2P10153 161 aaKnown RBP15.14■□□□□ 0.01
CCDC78-206ENST00000463539 VWC2Q2TAL6 325 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms