RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 DDB2Q92466 427 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 HIST1H2BHQ93079 126 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 OR2V2Q96R30 315 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 GPHA2Q96T91 129 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 HIST1H2BNQ99877 126 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 HIST1H2BMQ99879 126 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 MRPL32Q9BYC8 188 aaKnown RBP3.89□□□□□ -1.79
VPS72-203ENST00000463470 OPN3Q9H1Y3 402 aaPredicted RBP3.89□□□□□ -1.79
VPS72-203ENST00000463470 PARLQ9H300 379 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 PLEKHA3Q9HB20 300 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 MSL2Q9HCI7 577 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 TMEM140Q9NV12 185 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 BET1LQ9NYM9 111 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 IDI2-AS1Q9NZ38 188 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 DUSP13Q9UII6 198 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 LINC00312Q9Y6C7 94 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 ESPL1Q14674 2120 aa3.89□□□□□ -1.79
VPS72-203ENST00000463470 SETD2Q9BYW2 2564 aaPredicted RBP3.89□□□□□ -1.79
VPS72-203ENST00000463470 TEP1Q99973 2627 aaKnown RBP3.89□□□□□ -1.79
VPS72-203ENST00000463470 KIAA2026Q5HYC2 2103 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 SPTBN1Q01082 2364 aaKnown RBP3.88□□□□□ -1.79
VPS72-203ENST00000463470 MDFIC2A0A1B0GVS7 189 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 C9JCJ5 164 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 C16orf97H3BN30 126 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 DVL1O14640 695 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 WNT9BO14905 357 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 FSTL3O95633 263 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 GCGP01275 180 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 GYPAP02724 150 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 TRGC2P03986 189 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 TRGC1P0CF51 173 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 USF1P22415 310 aaPredicted RBP3.88□□□□□ -1.79
VPS72-203ENST00000463470 MC5RP33032 325 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 ZNF83P51522 516 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 FGF8P55075 233 aaPredicted RBP3.88□□□□□ -1.79
VPS72-203ENST00000463470 EDDM3BP56851 147 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 ERVFRD-1P60508 538 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 ERHP84090 104 aaKnown RBP3.88□□□□□ -1.79
VPS72-203ENST00000463470 RBPJQ06330 500 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 IZUMO4Q1ZYL8 232 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 C2orf83Q53S99 150 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 STUMQ69YW2 141 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 ETFRF1Q6IPR1 90 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 BTNL3Q6UXE8 466 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 TREML4Q6UXN2 200 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 ZNF788Q6ZQV5 615 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 TMEM144Q7Z5S9 345 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 MOGAT3Q86VF5 341 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 LURAP1LQ8IV03 231 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 STXBP6Q8NFX7 210 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 OR1L8Q8NGR8 309 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 OR5R1Q8NH85 324 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 RFESDQ8TAC1 157 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 TMEM170AQ8WVE7 144 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 TNFRSF14Q92956 283 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 TMEM18Q96B42 140 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 TMEM186Q96B77 213 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 PCGF1Q9BSM1 259 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 CHRDL1Q9BU40 450 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 QTRT1Q9BXR0 403 aaKnown RBP3.88□□□□□ -1.79
VPS72-203ENST00000463470 IFI27L2Q9H2X8 130 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 VSIRQ9H7M9 311 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 SLC25A22Q9H936 323 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 GSN-AS1Q9NRJ2 163 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 TMEM14BQ9NUH8 114 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 TECRQ9NZ01 308 aaKnown RBP3.88□□□□□ -1.79
VPS72-203ENST00000463470 TCF19Q9Y242 345 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 LSM4Q9Y4Z0 139 aaKnown RBP3.88□□□□□ -1.79
VPS72-203ENST00000463470 URGCP-MRPS24S4R325 110 aa3.88□□□□□ -1.79
VPS72-203ENST00000463470 MAP1AP78559 2803 aaPredicted RBP3.88□□□□□ -1.79
VPS72-203ENST00000463470 HEATR1Q9H583 2144 aaKnown RBP3.88□□□□□ -1.79
VPS72-203ENST00000463470 MTORP42345 2549 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 TGIF2-C20orf24A0A0A6YYL0 155 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 J3QR06 171 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 UPK2O00526 184 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 PAGE4O60829 102 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 IGKV1D-33P01593 117 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 IGKV1-33P01594 117 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 MT-ND6P03923 174 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 IL6RP08887 468 aaPredicted RBP3.87□□□□□ -1.79
VPS72-203ENST00000463470 CXCL1P09341 107 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 HIST1H1BP16401 226 aaKnown RBP3.87□□□□□ -1.79
VPS72-203ENST00000463470 CD40P25942 277 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 LGALS7P47929 136 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 CEBPDP49716 269 aaPredicted RBP3.87□□□□□ -1.79
VPS72-203ENST00000463470 PDLIM4P50479 330 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 BRWD1-AS2P59051 145 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 PKIAP61925 76 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 SELENOTP62341 195 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 PRR20EP86478 221 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 PRR20CP86479 221 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 PRR20DP86480 221 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 PRR20BP86481 221 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 PRR20AP86496 221 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 PRCDQ00LT1 54 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 KLRB1Q12918 225 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 TMEM177Q53S58 311 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 LRRC10Q5BKY1 277 aa3.87□□□□□ -1.79
VPS72-203ENST00000463470 OR2B11Q5JQS5 317 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms